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  1. Is Aldo Leopold's 'Land Community' an Individual?Roberta L. Millstein - 2018 - In O. Bueno, R. Chen & M. B. Fagan (eds.), Individuation across Experimental and Theoretical Sciences. Oxford University Press. pp. 279-302.
    The “land community” (or “biotic community”) that features centrally in Aldo Leopold’s Land Ethic has typically been equated with the concept of “ecosystem.” Moreover, some have challenged this central Leopoldean concept given the multitude of meanings of the term “ecosystem” and the changes the term has undergone since Leopold’s time (see, e.g., Shrader-Frechette 1996). Even one of Leopold’s primary defenders, J. Baird Callicott, asserts that there are difficulties in identifying the boundaries of ecosystems and suggests that we recognize that their (...)
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  • Randomness and perceived-randomness in evolutionary biology.William C. Wimsatt - 1980 - Synthese 43 (2):287 - 329.
  • Colleagues in conflict: An 'in vivo' analysis of the sociobiology controversy. [REVIEW]Ullica Segerstrale - 1986 - Biology and Philosophy 1 (1):53-87.
    Edward O. Wilson's forays into human sociobiology have been the target of persistent, vehement attack by his Harvard colleague in evolutionary biology, Richard C. Lewontin. Through examination of existing documents in the case, together with in-depth personal interviews of Wilson, Lewontin, and other biologists, the reasons for Wilson's stance and Lewontin's criticisms are uncovered. It is argued that the dispute is not primarily personally or politically motivated, but involves a conflict between long-term scientific-cum-moral agendas, with the reductionist program as a (...)
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  • Ecology and the Environment.A. Plutynski - 2008 - In Michael Ruse (ed.), The Oxford Handbook of Philosophy of Biology.
    Ecology is the study of the interactions of organisms and their environments. The methods of ecology fall roughly into three categories: descriptive surveys of patterns of species and resource distribution and abundance, theoretical modeling, and experimental manipulations. Ecological systems are “open” systems, and patterns and processes are products of a huge number of interacting forces. Ecology and the environmental sciences have made enormous advances since the mid-twentieth century in the understanding of ecological systems, as well as in the human impact (...)
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  • Complexity and verisimilitude: Realism for ecology. [REVIEW]Gregory M. Mikkelson - 2001 - Biology and Philosophy 16 (4):533-546.
    When data are limited, simple models of complex ecological systems tend to wind up closer to the truth than more complex models of the same systems. This greater proximity to the truth, or verisimilitude, leads to greater predictive success. When more data are available, the advantage of simplicity decreases, and more complex models may gain the upper hand. In ecology, holistic models are usually simpler than reductionistic models. Thus, when data are limited, holistic models have an advantage over reductionistic models, (...)
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  • Intertheoretic Reduction, Confirmation, and Montague’s Syntax-Semantics Relation.Kristina Liefke & Stephan Hartmann - 2018 - Journal of Logic, Language and Information 27 (4):313-341.
    Intertheoretic relations are an important topic in the philosophy of science. However, since their classical discussion by Ernest Nagel, such relations have mostly been restricted to relations between pairs of theories in the natural sciences. This paper presents a case study of a new type of intertheoretic relation that is inspired by Montague’s analysis of the linguistic syntax-semantics relation. The paper develops a simple model of this relation. To motivate the adoption of our new model, we show that this model (...)
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  • Habitat templets and the changing worldview of ecology.K. J. Korfiatis & G. P. Stamou - 1999 - Biology and Philosophy 14 (3):375-393.
    Habitat templets are graphical-qualitative models which describe the development of life-history strategies in specific environmental conditions. In the context of the previous models of life-history strategies, life-history theorists focused on the density-dependent factors as the factors determining life-history strategies. With the use of habitat templets, the focus is oriented towards the environmental causal factors, considering density-dependent phenomena as by-products of the environmental impact. This implies an important shift in causality as well as in the worldview of life-history theorists: population is (...)
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  • Prisoners of Abstraction? The Theory and Measure of Genetic Variation, and the Very Concept of 'Race'.Jonathan Michael Kaplan & Rasmus Grønfeldt Winther - 2013 - Biological Theory 7 (1):401-412.
    It is illegitimate to read any ontology about "race" off of biological theory or data. Indeed, the technical meaning of "genetic variation" is fluid, and there is no single theoretical agreed-upon criterion for defining and distinguishing populations (or groups or clusters) given a particular set of genetic variation data. Thus, by analyzing three formal senses of "genetic variation"—diversity, differentiation, and heterozygosity—we argue that the use of biological theory for making epistemic claims about "race" can only seem plausible when it relies (...)
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  • Methodology and Ontology in Microbiome Research.John Huss - 2014 - Biological Theory 9 (4):1-11.
    Research on the human microbiome has generated a staggering amount of sequence data, revealing variation in microbial diversity at the community, species (or phylotype), and genomic levels. In order to make this complexity more manageable and easier to interpret, new units—the metagenome, core microbiome, and enterotype—have been introduced in the scientific literature. Here, I argue that analytical tools and exploratory statistical methods, coupled with a translational imperative, are the primary drivers of this new ontology. By reducing the dimensionality of variation (...)
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  • Methodology and ontology in microbiome research.John Huss - 2014 - Biological Theory 9 (4):392-400.
    Research on the human microbiome has gen- erated a staggering amount of sequence data, revealing variation in microbial diversity at the community, species (or phylotype), and genomic levels. In order to make this complexity more manageable and easier to interpret, new units—the metagenome, core microbiome, and entero- type—have been introduced in the scientific literature. Here, I argue that analytical tools and exploratory statisti- cal methods, coupled with a translational imperative, are the primary drivers of this new ontology. By reducing the (...)
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  • Trivialization of Critique in Ecology.Yrjö Haila - 1997 - Biology and Philosophy 12 (1):109-118.
  • On the semiotic dimension of ecological theory: The case of island biogeography. [REVIEW]Yrjö Haila - 1986 - Biology and Philosophy 1 (4):377-387.
    The Macarthur-Wilson equilibrium theory of island biogeography has had a contradictory role in ecology. As a lasting contribution, the theory has created a new way of viewing insular environments as dynamical systems. On the other hand, many of the applications of the theory have reduced to mere unimaginative curve-fitting. I analyze this paradox in semiotic terms: the theory was mainly equated with the simple species-area relationship which became a signifier of interesting island ecology. The theory is, however, better viewed as (...)
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  • Laws in ecology: Diverse modes of explanation for a holistic science.Richard Gunton & Francis Gilbert - 2017 - Zygon 52 (2):538-560.
    Ecology's reputation as a holistic science is partly due to widespread misconceptions of its nature as well as shortcomings in its methodology. This article argues that the pursuit of empirical laws of ecology can foster the emergence of a more unified and predictive science based on complementary modes of explanation. Numerical analyses of population dynamics have a distinguished pedigree, spatial analyses generate predictive laws of macroecology, and physical analyses are typically pursued by the ecosystem paradigm. The most characteristically ecological laws, (...)
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  • Cladistic classification and functional explanation.P. E. Griffiths - 1994 - Philosophy of Science 61 (2):206-227.
    I adopt a cladistic view of species, and explore the possibility that there exists an equally valuable cladistic view of organismic traits. This suggestion seems to run counter to the stress on functional views of biological traits in recent work in philosophy and psychology. I show how the tension between these two views can be defused with a multilevel view of biological explanation. Despite the attractions of this compromise, I conclude that we must reject it, and adopt an essentially cladistic (...)
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  • Between beanbag genetics and natural selection.Raphael Falk - 1990 - Biology and Philosophy 5 (3):313-325.
    The encounter between the Darwinian theory of evolution and Mendelism could be resolved only when reductionist tools could be applied to the analysis of complex systems. The instrumental reductionist interpretation of the hereditary basis of continuously varying traits provided mathematical tools which eventually allowed the construction of the Modern Synthesis of the theory of evolution.When genotypic as well as environmental variance allow the isolation of parts of the system, it is possible to apply Mendelian reductionism, that is , to treat (...)
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  • The history of ecology: Achievements and opportunities, Part two.Frank N. Egerton - 1985 - Journal of the History of Biology 18 (1):103-143.
  • The history of ecology: Achievements and opportunities, part one.Frank N. Egerton - 1983 - Journal of the History of Biology 16 (2):259-310.
  • Does the study of facilitation require a revision of the Hutchinsonian niche concept?Antoine C. Dussault - 2022 - Biology and Philosophy 37 (2):1-22.
    This paper revisits the debate over whether the study of facilitation requires ecologists to revise their understanding of the relationship between realized and fundamental niches as conceptualized by Hutchinson. Following Rodriguez-Cabal et al., I argue against Bruno et al.’s claim that facilitation can make a species’ realized niche larger than its fundamental niche. However, I also maintain that the abstract Hutchinsonian conceptualization of the niche makes a whole range of facilitative interactions—which I propose to call ameliorative facilitation—invisible to niche-based approaches (...)
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  • In What Sense Can There Be Evolution by Natural Selection Without Perfect Inheritance?Pierrick Bourrat - 2019 - International Studies in the Philosophy of Science 32 (1):13-31.
    ABSTRACTIn Darwinian Population and Natural Selection, Peter Godfrey-Smith brought the topic of natural selection back to the forefront of philosophy of biology, highlighting different issues surro...
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  • How to Read ‘Heritability’ in the Recipe Approach to Natural Selection.Pierrick Bourrat - 2015 - British Journal for the Philosophy of Science 66 (4):883-903.
    There are two ways evolution by natural selection is conceptualized in the literature. One provides a ‘recipe’ for ENS incorporating three ingredients: variation, differences in fitness, and heritability. The other provides formal equations of evolutionary change and partitions out selection from other causes of evolutionary changes such as transmission biases or drift. When comparing the two approaches there seems to be a tension around the concept of heritability. A recent claim has been made that the recipe approach is flawed and (...)
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  • From survivors to replicators: evolution by natural selection revisited.Pierrick Bourrat - 2014 - Biology and Philosophy 29 (4):517-538.
    For evolution by natural selection to occur it is classically admitted that the three ingredients of variation, difference in fitness and heredity are necessary and sufficient. In this paper, I show using simple individual-based models, that evolution by natural selection can occur in populations of entities in which neither heredity nor reproduction are present. Furthermore, I demonstrate by complexifying these models that both reproduction and heredity are predictable Darwinian products (i.e. complex adaptations) of populations initially lacking these two properties but (...)
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  • An Ontic Account of Explanatory Reduction in Biology.Marie I. Kaiser - 2012 - Köln: Kölner Hochschulschriften.
    Convincing disputes about explanatory reductionism in the philosophy of biology require a clear and precise understanding of what a reductive explanation in biology is. The central aim of this book is to provide such an account by revealing the features that determine the reductive character of a biological explanation. Chapters I-IV provide the ground, on which I can then, in Chapter V, develop my own account of explanatory reduction in biology: Chapter I reveals the meta-philosophical assumptions that underlie my analysis (...)
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  • Holism and Reductionism in Biology and Ecology the Mutual Dependence of Higher and Lower Level Research Programmes.Rick C. Looijen - 2000 - Springer.
    Holism and reductionism are usually seen as opposite and mutually exclusive approaches to nature. Recently, some have come to see them as complementary rather than mutually exclusive. In this book I have argued that, even stronger, they should be seen as mutually dependent and co-operating research programmes. I have discussed holism and reductionism in biology in general and in ecology in particular. After an introductory chapter I have provided an overview of holistic and reductionistic positions in biology, and of the (...)
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  • Mathematical Modeling in Biology: Philosophy and Pragmatics.Rasmus Grønfeldt Winther - 2012 - Frontiers in Plant Evolution and Development 2012:1-3.
    Philosophy can shed light on mathematical modeling and the juxtaposition of modeling and empirical data. This paper explores three philosophical traditions of the structure of scientific theory—Syntactic, Semantic, and Pragmatic—to show that each illuminates mathematical modeling. The Pragmatic View identifies four critical functions of mathematical modeling: (1) unification of both models and data, (2) model fitting to data, (3) mechanism identification accounting for observation, and (4) prediction of future observations. Such facets are explored using a recent exchange between two groups (...)
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  • Multifaceted Ecology Between Organicism, Emergentism and Reductionism.Donato Bergandi - 2011 - In A. Schwarz & K. Jax (eds.), Ecology Revisited. Reflecting on Concepts, Advancing Science. Springer. pp. 31-43.
    The classical holism-reductionism debate, which has been of major importance to the development of ecological theory and methodology, is an epistemological patchwork. At any moment, there is a risk of it slipping into an incoherent, chaotic Tower of Babel. Yet philosophy, like the sciences, requires that words and their correlative concepts be used rigorously and univocally. The prevalent use of everyday language in the holism-reductionism issue may give a false impression regarding its underlying clarity and coherence. In reality, the conceptual (...)
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  • Montague Reduction, Confirmation, and the Syntax-Semantics Relation.Stephan Hartmann & Kristina Liefke - manuscript
    Intertheoretic relations are an important topic in the philosophy of science. However, since their classical discussion by Ernest Nagel, such relations have mostly been restricted to relations between pairs of theories in the natural sciences. In this paper, we present a model of a new type of intertheoretic relation, called 'Montague Reduction', which is assumed in Montague's framework for the analysis and interpretation of natural language syntax. To motivate the adoption of our new model, we show that this model extends (...)
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