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Emerging sciences and new conceptions of disease; or, beyond the monogenomic differentiated cell lineage

  • Original paper in Philosophy of Biology
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Abstract

This paper will begin with some very broad and general considerations about the kind of biological entities we are. This exercise is motivated by the belief that the view of what we—multicellular eukaryotic organisms—are that is widely assumed by biologists, medical scientists and the general public, is an extremely limited one. It cannot be assumed a priori that a more sophisticated view will make a major difference to the science or practice of medicine, and there are areas of medicine to which it is probably largely irrelevant. However, in this case there are important implications for medicine, or so I shall argue. In particular, it enables us to appreciate fully the potential medical significance of some of the most exciting contemporary advances in general biology, in such fields as epigenetics, metagenomics, and systems biology; and part of this significance is that these advances have raised serious doubts about how we should understand the biological individuals that medicine is generally assumed to aim to treat.

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Notes

  1. There is a further problem here in the tendency to reduce the cell to the genome. For present purposes I shall treat Dawkins view (charitably) as acknowledging the whole cell as the minimum unit of reproduction.

  2. In terms of Hull’s well-known distinction between replicators and interactors, we are saying that an interactor typically contains many different kinds of replicators. However I am sceptical of the ultimate viability of this distinction. From the developmental systems perspective that I advocate the whole interactor replicates itself, but it does so, in part, by virtue of the replication of many other replicators (which are also at their own scales interactors) of diverse kinds.

  3. Researchers concerned with the incidence of serious fungal infections of the skin that affect amphibians have found that application of a bacterium with fungicidal capacities to the skin can be an effective treatment (Harris et al. 2009). Comparable therapeutic uses of microbes in human medicine are at least an interesting possibility.

References

  • Allen, T. D., Moore, D. R., Wang, X., Casu, V., May, R., Lerner, M. R., et al. (2008). Dichotomous metabolism of Enterococcus faecalis induced by haematin starvation modulates colonic gene expression. Journal of Medical Microbiology, 57, 1193–1204.

    Article  Google Scholar 

  • Bollati, V., & Baccarelli, A. (2010). Environmental epigenetics. Heredity, 105, 105–112.

    Article  Google Scholar 

  • Covic, M., Karaca, E., & Lie, D. C. (2010). Epigenetic regulation of neurogenesis in the adult hippocampus. Heredity, 105, 122–134.

    Article  Google Scholar 

  • Dawkins, R. (1976). The selfish gene. Oxford: Oxford University Press.

    Google Scholar 

  • Dupré, J., & O’Malley, M. A. (2007). Metagenomics and biological ontology. Studies in the History and Philosophy of the Biological and Biomedical Sciences, 38, 834–846.

    Article  Google Scholar 

  • Dupré, J., & O’Malley, M. A. (2009). Varieties of living things: Life at the intersection of lineage and metabolism. Philosophy and Theory in Biology, 2009. http://hdl.handle.net/2027/spo.6959004.0001.003.

  • Harris, R. N., Brucker, R. M., Walke, J. B., Becker, M. H., Schwantes, C. R., Flaherty, D. C., et al. (2009). Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus. The ISME Journal, 3, 818–824.

    Article  Google Scholar 

  • Hehemann, J., Correc, G., Barbeyron, T., Helbert, W., Czjzek, M., & Michel, G. (2010). Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota. Nature, 464, 908–912.

    Article  Google Scholar 

  • Heijmans, B. T., Tobi, E. W., Stein, A. D., Putter, H., Blauw, G. J., et al. (2008). Persistent epigenetic differences associated with prenatal exposure to famine in humans. Proceedings of the National Academy of Sciences, USA, 105, 17046–17049.

    Article  Google Scholar 

  • Hill, M. J., Goddard, P., & Williams, R. E. O. (1971). Gut bacteria and aetiology of cancer of the breast. The Lancet, 298, 472–473.

    Article  Google Scholar 

  • Hirano, S. S., & Upper, C. D. (2000). Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae: a pathogen, ice nucleus, and epiphyte. Microbiology and Molecular Biology Reviews, 64, 624–653.

    Article  Google Scholar 

  • Klein, F., Amin Kotb, W. F., & Petersen, I. (2009). Incidence of human papilloma virus in lung cancer. Lung Cancer, 65, 13–18.

    Article  Google Scholar 

  • Kripke, S. (1980). Naming and necessity. Cambridge: Harvard University Press.

    Google Scholar 

  • Lai, Y., Di Nardo, A., Nakatsuji, T., Leichtle, A., Yang, Y., Cogen, A. L., et al. (2009). Commensal bacteria regulate Toll-like receptor 3–dependent inflammation after skin injury. Nature Medicine, 15, 1377–1382.

    Article  Google Scholar 

  • Méthot, P-O. (forthcoming, 2010). Research traditions and styles of explanation in evolutionary studies of medicine. Journal of Theoretical Medicine and Bioethics.

  • Morgan, D. K., & Whitelaw, E. (2008). The case for transgenerational epigenetic inheritance in humans. Mammalian Genome, 19, 394–397.

    Article  Google Scholar 

  • O’Malley, M. A., & Dupré, J. (2007). Size doesn’t matter: towards a more inclusive philosophy of biology. Biology and Philosophy, 22, 155–191.

    Article  Google Scholar 

  • Oyama, S., Griffiths, P. E., & Gray, R. D. (Eds.). (2001). Cycles of contingency: Developmental systems and evolution. Cambridge: MIT.

    Google Scholar 

  • Paxson, H. (2008). Post-Pasteurian cultures: the microbiopolitics of raw-milk cheese in the United States. Cultural Anthropology, 23, 15–47.

    Article  Google Scholar 

  • Pradeu, T. (forthcoming). The limits of the self. Immunology and biological identity. Oxford: Oxford University Press.

  • Rawls, J. F., Samuel, B. S., & Gordon, J. I. (2004). Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. Proceedings of the National Academy of Sciences, U S A, 101, 4596–4601.

    Article  Google Scholar 

  • Venkataraman, S., Reddy, S. P., Loo, J., Idamakanti, N., Hallenbeck, P. L., & Reddy, V. S. (2008). Structure of Seneca Valley Virus-001, an oncolytic picornavirus representing a new genus. Structure, 16, 1555–1561.

    Article  Google Scholar 

  • Webster, N. S., & Blackall, L. L. (2009). What do we really know about sponge-microbial symbioses? The ISME Journal (2009) 3, 1–3, 2003.

    Google Scholar 

  • West Eberhard, M. J. (2003). Developmental plasticity and evolution. New York: Oxford University Press.

    Google Scholar 

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Acknowledgements

This paper has benefitted from comments from Sabina Leonelli, Pierre-Olivier Méthot, Staffan Müller-Wille, and Maureen O’Malley. I also gratefully acknowledge funding from the Economic and Social Research Council (UK). The research in this paper was part of the programme of the ESRC Centre for Genomics in Society (Egenis)

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Dupré, J. Emerging sciences and new conceptions of disease; or, beyond the monogenomic differentiated cell lineage. Euro Jnl Phil Sci 1, 119–131 (2011). https://doi.org/10.1007/s13194-010-0008-0

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