Biomedical informatics and granularity
Comparative and Functional Genomics 5:501-508 (2004)
| Abstract | An explicit formal-ontological representation of entities existing at multiple levels of granularity is an urgent requirement for biomedical information processing. We discuss some fundamental principles which can form a basis for such a representation. We also comment on some of the implicit treatments of granularity in currently available ontologies and terminologies (GO, FMA, SNOMED CT). | |||||||||
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Barry Smith (2005). A Strategy for Improving and Integrating Biomedical Ontologies. In Proceedings of the Annual Symposium of the American Medical Informatics Association. AMIA.
Barry Smith & Cornelius Rosse (2004). The Role of Foundational Relations in the Alignment of Biomedical Ontologies. In Medinfo. IOS Press.
Cornelius Rosse, Anand Kumar, Jose Leonardo V. Mejino, Dan Cook, Landon T. Detwiler & Barry Smith (2005). A Strategy for Improving and Integrating Biomedical Ontologies. In Proceedings of AMIA Symposium. AMIA.
Marvin R. G. Schiller (2013). Granularity Analysis for Mathematical Proofs. Topics in Cognitive Science 5 (2):251-269.
Chris Cummins, Uli Sauerland & Stephanie Solt (2012). Granularity and Scalar Implicature in Numerical Expressions. Linguistics and Philosophy 35 (2):135-169.
Anand Kumar & Barry Smith, The Ontology of Blood Pressure: A Case Study in Creating Ontological Partitions in Biomedicine. IFOMIS Reports.
Gary H. Merrill (2010). Ontological Realism: Methodology or Misdirection? Applied Ontology 5 (2):79-108.
Barry Smith (2006). From Concepts to Clinical Reality: An Essay on the Benchmarking of Biomedical Terminologies. Journal of Biomedical Informatics 39 (3):288-298.
Barry Smith (2006). Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain. In Proceedings of KR-MED.
Daniel L. Rubin (2012). Finding the Meaning in Images: Annotation and Image Markup. Philosophy, Psychiatry, and Psychology 18 (4).
Anand Kumar & Barry Smith (2003). The Unified Medical Language System and the Gene Ontology: Some Critical Reflections. In KI 2003: Advances in Artificial Intelligence.
Barry Smith (2012). Classifying Processes: An Essay in Applied Ontology. Ratio 25 (4):463-488.
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