Philosophy of Biology

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  1. A Potential New Mechanism Linking Type II Diabetes Mellitus and Alzheimer's Disease.Alejandro P. Adam - 2018 - Bioessays 40 (6).
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  2. RNase III Nucleases and the Evolution of Antiviral Systems.Lauren C. Aguado & Benjamin R. tenOever - 2018 - Bioessays 40 (2):1700173.
    Every living entity requires the capacity to defend against viruses in some form. From bacteria to plants to arthropods, cells retain the capacity to capture genetic material, process it in a variety of ways, and subsequently use it to generate pathogen-specific small RNAs. These small RNAs can then be used to provide specificity to an otherwise non-specific nuclease, generating a potent antiviral system. While small RNA-based defenses in chordates are less utilized, the protein-based antiviral invention in this phylum appears to (...)
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  3. Reconsidering Morphology Through an Experimental Case Study.Liliana Albertazzi, Luisa Canal, Paolo Chistè, Mara De Rosa, Rocco Micciolo & Alessandro Minelli - 2017 - Biological Theory 12 (3):131-141.
    This study analyzes shells of marine gastropods of a zoological museum and the Latin epithets expressing perceptual and connotative attributes that they have received in the standard, Linnaean nomenclature. Making use of the Osgood semantic differential, we presented the subjects with digital 3-D reproductions of the shell specimens to be subjectively evaluated according to 17 pairs of attributes. The results show that, overall, the subjective evaluations given by the subjects are consistent, which suggests that an intersubjective characterization of the shells (...)
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  4. A Mathematical Science of Qualities: A Sequel.Liliana Albertazzi & A. H. Louie - 2016 - Biological Theory 11 (4):192-206.
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  5. A Mathematical Science of Qualities: A Sequel.Liliana Albertazzi & A. H. Louie - 2016 - Biological Theory 11 (4):192-206.
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  6. Where Animals Go.R. McNeill Alexander - 2006 - Biological Theory 1 (4):433-434.
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  7. Reassigning Stop Codons Via Translation Termination: How a Few Eukaryotes Broke the Dogma.Elena Alkalaeva & Tatiana Mikhailova - 2017 - Bioessays 39 (3):1600213.
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  8. Reassigning Stop Codons Via Translation Termination: How a Few Eukaryotes Broke the Dogma.Elena Alkalaeva & Tatiana Mikhailova - 2017 - Bioessays 39 (3):1600213.
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  9. Nowhere to run, rabbit: the cold-war calculus of disease ecology.Warwick Anderson - 2017 - History and Philosophy of the Life Sciences 39 (2):13.
    During the cold war, Frank Fenner and Francis Ratcliffe studied mathematically the coevolution of host resistance and parasite virulence when myxomatosis was unleashed on Australia’s rabbit population. Later, Robert May called Fenner the “real hero” of disease ecology for his mathematical modeling of the epidemic. While Ratcliffe came from a tradition of animal ecology, Fenner developed an ecological orientation in World War II through his work on malaria control —that is, through studies of tropical medicine. This makes Fenner at least (...)
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  10. Jane Carruthers, National Park Science: A Century of Research in South Africa , 554 pp., illus., bibl., $67.72 Hardback, ISBN 9781107191440. [REVIEW]Peder Anker - forthcoming - Journal of the History of Biology:1-3.
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  11. Dysfunction, Disease, and the Limits of Selection.Zachary Ardern - 2018 - Biological Theory 13 (1):4-9.
    Paul Griffiths and John Matthewson argue that selected effects play the key role in determining whether a state is pathological. In response, it is argued that a selected effects account faces a number of difficulties in light of modern genomic research. Firstly, a modern history approach to selection is problematic as a basis for assigning function to human traits in light of the small population sizes in the hominin lineage, which imply that selection has played a limited role in shaping (...)
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  12. Traversing Birth: Continuity and Contingency in Research on Development in Nineteenth-Century Life and Human Sciences.Caroline Arni - 2015 - History and Philosophy of the Life Sciences 37 (1):50-67.
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  13. Traversing Birth: Continuity and Contingency in Research on Development in Nineteenth-Century Life and Human Sciences.Caroline Arni - 2015 - History and Philosophy of the Life Sciences 37 (1):50-67.
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  14. Biological Discourses on Human Races and Scientific Racism in Brazil.Juanma Sánchez Arteaga - 2017 - Journal of the History of Biology 50 (2):267-314.
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  15. Bengt Olle Bengtsson & Gunnar Broberg , Bortom det acceptablas gränser. Bengt Lidforss och lundaradikalismen.J. Arvid Ågren - 2015 - History and Philosophy of the Life Sciences 37 (1):126-128.
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  16. Bengt Olle Bengtsson & Gunnar Broberg , Bortom det acceptablas gränser. Bengt Lidforss och lundaradikalismen.J. Arvid Ågren - 2015 - History and Philosophy of the Life Sciences 37 (1):126-128.
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  17. Mitochondrial Heterogeneity, Metabolic Scaling and Cell Death.Juvid Aryaman, Hanne Hoitzing, Joerg P. Burgstaller, Iain G. Johnston & Nick S. Jones - 2017 - Bioessays 39 (7):1700001.
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  18. Mitochondrial Heterogeneity, Metabolic Scaling and Cell Death.Juvid Aryaman, Hanne Hoitzing, Joerg P. Burgstaller, Iain G. Johnston & Nick S. Jones - 2017 - Bioessays 39 (7):1700001.
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  19. Genome Evolution is Driven by Gene Expression-Generated Biophysical Constraints Through RNA-Directed Genetic Variation: A Hypothesis.Didier Auboeuf - 2017 - Bioessays 39 (10):1700069.
    The biogenesis of RNAs and proteins is a threat to the cell. Indeed, the act of transcription and nascent RNAs challenge DNA stability. Both RNAs and nascent proteins can also initiate the formation of toxic aggregates because of their physicochemical properties. In reviewing the literature, I show that co-transcriptional and co-translational biophysical constraints can trigger DNA instability that in turn increases the likelihood that sequences that alleviate the constraints emerge over evolutionary time. These directed genetic variations rely on the biogenesis (...)
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  20. The Role of Fertilization.C. R. Austin - 1959 - Perspectives in Biology and Medicine 3 (1):44-54.
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  21. A Biologically Informed Hylomorphism.Christopher J. Austin - 2017 - In William M. R. Simpson, Robert C. Koons & Nicholas J. Teh (eds.), Neo-Aristotelian Perspectives on Contemporary Science. Routledge. pp. 185-210.
    Although contemporary metaphysics has recently undergone a neo-Aristotelian revival wherein dispositions, or capacities are now commonplace in empirically grounded ontologies, being routinely utilised in theories of causality and modality, a central Aristotelian concept has yet to be given serious attention – the doctrine of hylomorphism. The reason for this is clear: while the Aristotelian ontological distinction between actuality and potentiality has proven to be a fruitful conceptual framework with which to model the operation of the natural world, the distinction between (...)
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  22. The Ontology of Organisms: Mechanistic Modules or Patterned Processes?Christopher J. Austin - 2016 - Biology and Philosophy 31 (5):639-662.
    Though the realm of biology has long been under the philosophical rule of the mechanistic magisterium, recent years have seen a surprisingly steady rise in the usurping prowess of process ontology. According to its proponents, theoretical advances in the contemporary science of evo-devo have afforded that ontology a particularly powerful claim to the throne: in that increasingly empirically confirmed discipline, emergently autonomous, higher-order entities are the reigning explanantia. If we are to accept the election of evo-devo as our best conceptualisation (...)
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  23. Structural Powers and the Homeodynamic Unity of Organisms.Christopher J. Austin & Anna Marmodoro - 2017 - In William M. R. Simpson, Robert C. Koons & Nicholas J. Teh (eds.), Neo-Aristotelian Perspectives on Contemporary Science. Routledge. pp. 169-184.
    Although they are continually compositionally reconstituted and reconfigured, organisms nonetheless persist as ontologically unified beings over time – but in virtue of what? A common answer is: in virtue of their continued possession of the capacity for morphological invariance which persists through, and in spite of, their mereological alteration. While we acknowledge that organisms‟ capacity for the “stability of form” – homeostasis - is an important aspect of their diachronic unity, we argue that this capacity is derived from, and grounded (...)
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  24. The Organism in Interdisciplinary Context: Proceedings of the STOQ Research Group on Organisms Edited by Pietro Ramellini.Nicanor Pier Giorgio Austriaco - 2008 - The National Catholic Bioethics Quarterly 8 (3):599-602.
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  25. Error Management, Reliability and Cognitive Evolution.Bengt Autzen - 2017 - Biology and Philosophy 32 (6):935-950.
    The paper offers a partial vindication of Sterelny’s view on the role of error rates and reliability in his theory of decoupled representation based on modelling techniques borrowed from the biological literature on evolution in stochastic environments. In the case of a tight link between tracking states and behaviour, I argue that in its full generality Sterelny’s account instantiates the base-rate fallacy. With regard to non-tightly linked behaviour, I show that Sterelny’s account can be vindicated subject to an adequate evolutionary (...)
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  26. Dissolving the Star-Tree Paradox.Bengt Autzen - 2016 - Biology and Philosophy 31 (3):409-419.
    While Bayesian methods have become very popular in phylogenetic systematics, the foundations of this approach remain controversial. The star-tree paradox in Bayesian phylogenetics refers to the phenomenon that a particular binary phylogenetic tree sometimes has a very high posterior probability even though a star tree generates the data. I argue that this phenomenon reveals an unattractive feature of the Bayesian approach to scientific inference and discuss two proposals for how to address the star-tree paradox. In particular, I defend the polytomy (...)
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  27. Captivating Life: A Naturalist in the Age of Genetics.John C. Avise - 2002 - Journal of the History of Biology 35 (3):602-604.
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  28. Multiple Dimensions of Epigenetic Gene Regulation in the Malaria parasitePlasmodium Falciparum.Ferhat Ay, Evelien M. Bunnik, Nelle Varoquaux, Jean-Philippe Vert, William Stafford Noble & Karine G. Le Roch - 2015 - Bioessays 37 (2):182-194.
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  29. Frédéric Bouchard and Philippe Huneman, Eds.: From Groups to Individuals. Evolution and Emerging Individuality.J. Ayala Francisco - 2014 - History and Philosophy of the Life Sciences 36 (1):136-138.
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  30. Frédéric Bouchard and Philippe Huneman, Eds.: From Groups to Individuals. Evolution and Emerging Individuality.J. Ayala Francisco - 2014 - History and Philosophy of the Life Sciences 36 (1):136-138.
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  31. The Biological Concept of Progress.F. J. Ayala - 1974 - In F. Ayala & T. Dobzhansky (eds.), Studies in the Philosophy of Biology. University of California Press. pp. 339--354.
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  32. Science, Evolution and Natural Selection: In Praise of Darwin at the Stazione Zoologica Anton Dohrn of Naples.Francisco J. Ayala - 2015 - History and Philosophy of the Life Sciences 36 (3):444-455.
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  33. 19. The Concept of Biological Progress.Francisco J. Ayala - 1974 - In Francisco Jose Ayala & Theodosius Grigorievich Dobzhansky (eds.), Studies in the Philosophy of Biology: Reduction and Related Problems. University of California Press. pp. 339.
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  34. Studies in the Philosophy of Biology: Reduction and Related Problems.Francisco Jose Ayala & Theodosius Dobzhansky - 1977 - Journal of the History of Biology 10 (2):370-371.
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  35. Harry Marshall Ward and the Fungal Thread of Death.Peter G. Ayres - 2006 - Journal of the History of Biology 39 (1):212-214.
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  36. Heredity Versus Evolution.Larry Azar - 1971 - Philosophical Studies 20:152-165.
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  37. Permanence and Extinction of a Diffusive Predator–Prey Model with Robin Boundary Conditions.M. A. Aziz-Alaoui, M. Daher Okiye & A. Moussaoui - forthcoming - Acta Biotheoretica.
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  38. Heterotrimeric G Protein Signaling Via GIV/Girdin: Breaking the Rules of Engagement, Space, and Time.Nicolas Aznar, Nicholas Kalogriopoulos, Krishna K. Midde & Pradipta Ghosh - 2016 - Bioessays 38 (4):379-393.
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  39. Heterotrimeric G Protein Signaling Via GIV/Girdin: Breaking the Rules of Engagement, Space, and Time.Nicolas Aznar, Nicholas Kalogriopoulos, Krishna K. Midde & Pradipta Ghosh - 2016 - Bioessays 38 (4):379-393.
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  40. Darwin y Lorenz: La Conexión Humana.Avedis Aznavurian - 2003 - Ludus Vitalis 9 (20):5-16.
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  41. Institutionalizing Molecular Biology in Post-War Europe: A Comparative Study.J. B. - 2002 - Studies in History and Philosophy of Science Part C 33 (3):515-546.
    The intellectual origins of molecular biology are usually traced back to the 1930s. By contrast, molecular biology acquired a social reality only around 1960. To understand how it came to designate a community of researchers and a professional identity, I examine the creation of the first institutes of molecular biology, which took place around 1960, in four European countries: Germany, the United Kingdom, France, and Switzerland. This paper shows how the creation of these institutes was linked to the results of (...)
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  42. Ins and Outs of Systems Biology Vis-À-Vis Molecular Biology: Continuation or Clear Cut?Philippe Backer, Danny Waele & Linda Speybroeck - 2010 - Acta Biotheoretica 58 (1):15-49.
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