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  1. Categorical Abstractions of Molecular Structures of Biological Objects: A Case Study of Nucleic Acids.Jinyeong Gim - 2023 - Global Philosophy 33 (5):No.43.
    The type-level abstraction is a formal way to represent molecular structures in biological practice. Graphical representations of molecular structures of biological objects are also used to identify functional processes of things. This paper will reveal that category theory is a formal mathematical language not only to visualize molecular structures of biological objects as type-level abstraction formally but also to understand how to infer biological functions from the molecular structures of biological objects. Category theory is a toolkit to understand biological knowledge (...)
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  • Reduction.A. Hütterman & A. C. Love - 2016 - In Paul Humphreys (ed.), The Oxford Handbook of Philosophy of Science. Oxford University Press USA. pp. 460-484.
    Reduction and reductionism have been central philosophical topics in analytic philosophy of science for more than six decades. Together they encompass a diversity of issues from metaphysics and epistemology. This article provides an introduction to the topic that illuminates how contemporary epistemological discussions took their shape historically and limns the contours of concrete cases of reduction in specific natural sciences. The unity of science and the impulse to accomplish compositional reduction in accord with a layer-cake vision of the sciences, the (...)
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  • Theory structure, reduction, and disciplinary integration in biology.Kenneth F. Schaffner - 1993 - Biology and Philosophy 8 (3):319-347.
    This paper examines the nature of theory structure in biology and considers the implications of those theoretical structures for theory reduction. An account of biological theories as interlevel prototypes embodying causal sequences, and related to each other by strong analogies, is presented, and examples from the neurosciences are provided to illustrate these middle-range theories. I then go on to discuss several modifications of Nagel''s classical model of theory reduction, and indicate at what stages in the development of reductions these models (...)
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  • Reduction: the Cheshire cat problem and a return to roots.Kenneth F. Schaffner - 2006 - Synthese 151 (3):377-402.
    In this paper, I propose two theses, and then examine what the consequences of those theses are for discussions of reduction and emergence. The first thesis is that what have traditionally been seen as robust, reductions of one theory or one branch of science by another more fundamental one are a largely a myth. Although there are such reductions in the physical sciences, they are quite rare, and depend on special requirements. In the biological sciences, these prima facie sweeping reductions (...)
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  • Genes, behavior, and developmental emergentism: One process, indivisible?Kenneth F. Schaffner - 1998 - Philosophy of Science 65 (2):209-252.
    The question of the influence of genes on behavior raises difficult philosophical and social issues. In this paper I delineate what I call the Developmentalist Challenge (DC) to assertions of genetic influence on behavior, and then examine the DC through an indepth analysis of the behavioral genetics of the nematode, C. elegans, with some briefer references to work on Drosophila. I argue that eight "rules" relating genes and behavior through environmentally-influenced and tangled neural nets capture the results of developmental and (...)
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  • The Varieties of Molecular Explanation.Marco J. Nathan - 2012 - Philosophy of Science 79 (2):233-254.
    Reductionists in biology claim that all biological events can be explained in terms of genes and macromolecules alone, while antireductionists argue that some biological events must be explained at a higher level. The literature, however, does not distinguish between different kinds of molecular explanation. The goal of this article is to identify and analyze three such kinds. The analysis of molecular explanations herein carries an important philosophical implication; in shunning crude reductionism and extreme versions of holism, we can combine the (...)
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  • Reduction, explanatory extension, and the mind/brain sciences.Valerie Gray Hardcastle - 1992 - Philosophy of Science 59 (3):408-28.
    In trying to characterize the relationship between psychology and neuroscience, the trend has been to argue that reductionism does not work without suggesting a suitable substitute. I offer explanatory extension as a good model for elucidating the complex relationship among disciplines which are obviously connected but which do not share pragmatic explanatory features. Explanatory extension rests on the idea that one field can "illuminate" issues that were incompletely treated in another. In this paper, I explain how this "illumination" would work (...)
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  • Discovering the moment of consciousness? I: Bridging techniques at work, & II.Valerie Gray Hardcastle - 1996 - Philosophical Psychology 9 (2):149-96.
    Abstract Connectionist views in psychology and neuroscience give the impression that there is no one place in the brain into which all information funnels. If these impression are accurate, then we will have great difficulty picking out a point in neuronal or psychological time at which phenomena become conscious. If so, pointing to one place in which we are conscious of a particular event and expecting a psychophysical correlation between qualitative and neural events seems hopeless. In response to this worry, (...)
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  • Discovering the moment of consciousness? I: Bridging techniques at work.Valerie Gray Hardcastle - 1996 - Philosophical Psychology 9 (2):149 – 166.
    Connectionist views in psychology and neuroscience give the impression that there is no one place in the brain into which all information funnels. If these impression are accurate, then we will have great difficulty picking out a point in neuronal or psychological time at which phenomena become conscious. If so, pointing to one place in which we are conscious of a particular event and expecting a psychophysical correlation between qualitative and neural events seems hopeless. In response to this worry, I (...)
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  • Elaborating the structures of a science discipline to improve problem-solving instruction: An account of Classical Genetics' theory structure, function, and development.Robert Hafner & Sylvia Culp - 1996 - Science & Education 5 (4):331-355.
  • New Perspectives on Theory Change in Evolutionary Biology.Alejandro Fábregas-Tejeda - 2019 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 50 (4):573-581.
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  • New Perspectives on Theory Change in Evolutionary Biology: Workshop ‘The Extended Evolutionary Synthesis: Philosophical and Historical Dimensions’, Ruhr University Bochum, Germany, March 21–22, 2019. [REVIEW]Alejandro Fábregas-Tejeda - 2019 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 50 (4):573-581.
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  • Rationality in discovery : a study of logic, cognition, computation and neuropharmacology. Boscvanh, Alexander Petrus Maria den - unknown
    Part I Introduction The specific problem adressed in this thesis is: what is the rational use of theory and experiment in the process of scientific discovery, in theory and in the practice of drug research for Parkinson’s disease? The thesis aims to answer the following specific questions: what is: 1) the structure of a theory?; 2) the process of scientific reasoning?; 3) the route between theory and experiment? In the first part I further discuss issues about rationality in science as (...)
     
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