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  1. Sameness in Biology.Grant Ramsey & Anne Siebels Peterson - 2012 - Philosophy of Science 79 (2):255-275.
  • Philosophy and Phylogenetics.Joel D. Velasco - 2013 - Philosophy Compass 8 (10):990-998.
    Phylogenetics is the study and reconstruction of evolutionary history and is filled with numerous foundational issues of interest to philosophers. This paper briefly introduces some central concepts in the field, describes some of the main methods for inferring phylogenies, and provides some arguments for the superiority of model-based methods such as Likelihood and Bayesian methods over nonparametric methods such as parsimony. It also raises some underdeveloped issues in the field of interest to philosophers.
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  • The Edges and Boundaries of Biological Objects.Jay Odenbaugh & Matt Haber - 2009 - Biological Theory 4 (3):219-224.
  • What's Wrong with the New Biological Essentialism.Marc Ereshefsky - 2010 - Philosophy of Science 77 (5):674-685.
    The received view in the philosophy of biology is that biological taxa (species and higher taxa) do not have essences. Recently, some philosophers (Boyd, Devitt, Griffiths, LaPorte, Okasha, and Wilson) have suggested new forms of biological essentialism. They argue that according to these new forms of essentialism, biological taxa do have essences. This article critically evaluates the new biological essentialism. This article’s thesis is that the costs of adopting the new biological essentialism are many, yet the benefits are none, so (...)
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  • Homology Thinking.Marc Ereshefsky - 2012 - Biology and Philosophy 27 (3):381-400.
    This paper explores an important type of biological explanation called ‘homology thinking.’ Homology thinking explains the properties of a homologue by citing the history of a homologue. Homology thinking is significant in several ways. First, it offers more detailed explanations of biological phenomena than corresponding analogy explanations. Second, it provides an important explanation of character similarity and difference. Third, homology thinking offers a promising account of multiple realizability in biology.
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