Switch to: References

Add citations

You must login to add citations.
  1. Character analysis in cladistics: Abstraction, reification, and the search for objectivity.Rasmus Grønfeldt Winther - 2009 - Acta Biotheoretica 57 (1-2):129-162.
    The dangers of character reification for cladistic inference are explored. The identification and analysis of characters always involves theory-laden abstraction—there is no theory-free “view from nowhere.” Given theory-ladenness, and given a real world with actual objects and processes, how can we separate robustly real biological characters from uncritically reified characters? One way to avoid reification is through the employment of objectivity criteria that give us good methods for identifying robust primary homology statements. I identify six such criteria and explore each (...)
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   9 citations  
  • Opaque and Translucent Epistemic Dependence in Collaborative Scientific Practice.Susann Wagenknecht - 2014 - Episteme 11 (4):475-492.
    This paper offers an analytic perspective on epistemic dependence that is grounded in theoretical discussion and field observation at the same time. When in the course of knowledge creation epistemic labor is divided, collaborating scientists come to depend upon one another epistemically. Since instances of epistemic dependence are multifarious in scientific practice, I propose to distinguish between two different forms of epistemic dependence, opaque and translucent epistemic dependence. A scientist is opaquely dependent upon a colleague if she does not possess (...)
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   18 citations  
  • Model Organisms as Scientific Representations.Lorenzo Sartori - forthcoming - British Journal for the Philosophy of Science.
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark  
  • The animal model of human disease as a core concept of medical research: Historical cases, failures, and some epistemological considerations.Volker Roelcke - 2022 - Science in Context 35 (2):173-197.
    ArgumentThis article uses four historical case studies to address epistemological issues related to the animal model of human diseases and its use in medical research on human diseases. The knowledge derived from animal models is widely assumed to be highly valid and predictive of reactions by human organisms. In this contribution, I use three significant historical cases of failure (ca. 1890, 1960, 2006), and a closer look at the emergence of the concept around 1860/70, to elucidate core assumptions related to (...)
    No categories
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark  
  • Rats, stress and the built environment.Edmund Ramsden - 2012 - History of the Human Sciences 25 (5):123-147.
    From 1942 to 1952, a programme took place at Johns Hopkins to devise new methods of controlling Baltimore’s rat population. This article focuses on three individuals closely connected to this project at various stages of its development: psycho-biologist Curt Richter, animal ecologist David E. Davis, and ecologist and psychologist John B. Calhoun. For all three, the challenges of controlling rat numbers highlighted the significance of stress – a homeostatic mechanism critical to the survival of the animal. This was a process (...)
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   2 citations  
  • From Rodent Utopia to Urban Hell: Population, Pathology, and the Crowded Rats of NIMH.Edmund Ramsden - 2011 - Isis 102 (4):659-688.
    ABSTRACT In a series of experiments at the National Institute of Mental Health, the animal ecologist John B. Calhoun offered rats everything they needed, except space. The resulting population explosion was followed by a series of “social pathologies”—violence, sexual deviance, and withdrawal. This essay examines the influence of Calhoun's experiments among psychologists and sociologists concerned with the effects of the built environment on health and behavior. Some saw evidence of the danger of the crowd in Calhoun's “rat cities” and fastened (...)
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   7 citations  
  • From Rodent Utopia to Urban Hell: Population, Pathology, and the Crowded Rats of NIMH.Edmund Ramsden - 2011 - Isis 102 (4):659-688.
    ABSTRACT In a series of experiments at the National Institute of Mental Health, the animal ecologist John B. Calhoun offered rats everything they needed, except space. The resulting population explosion was followed by a series of “social pathologies”—violence, sexual deviance, and withdrawal. This essay examines the influence of Calhoun's experiments among psychologists and sociologists concerned with the effects of the built environment on health and behavior. Some saw evidence of the danger of the crowd in Calhoun's “rat cities” and fastened (...)
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   5 citations  
  • A Neurotic Dog’s Life: Experimental Psychiatry and the Conditional Reflex Method in the Work of W. Horsley Gantt.Edmund Ramsden - 2018 - Isis 109 (2):276-301.
    No categories
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   3 citations  
  • Saving the gene pool for the future: Seed banks as archives.Sara Peres - 2016 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 55:96-104.
    No categories
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   9 citations  
  • Re-thinking organisms: The impact of databases on model organism biology.Sabina Leonelli & Rachel A. Ankeny - 2012 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 43 (1):29-36.
    Community databases have become crucial to the collection, ordering and retrieval of data gathered on model organisms, as well as to the ways in which these data are interpreted and used across a range of research contexts. This paper analyses the impact of community databases on research practices in model organism biology by focusing on the history and current use of four community databases: FlyBase, Mouse Genome Informatics, WormBase and The Arabidopsis Information Resource. We discuss the standards used by the (...)
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   38 citations  
  • Integrating data to acquire new knowledge: Three modes of integration in plant science.Sabina Leonelli - 2013 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 44 (4):503-514.
    This paper discusses what it means and what it takes to integrate data in order to acquire new knowledge about biological entities and processes. Maureen O’Malley and Orkun Soyer have pointed to the scientific work involved in data integration as important and distinct from the work required by other forms of integration, such as methodological and explanatory integration, which have been more successful in captivating the attention of philosophers of science. Here I explore what data integration involves in more detail (...)
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   35 citations  
  • Heritable changeability: Epimutation and the legacy of negative definition in epigenetic concepts.Anne Le Goff, Patrick Allard & Hannah Landecker - 2021 - Studies in History and Philosophy of Science Part A 86:35-46.
  • The Bermuda Triangle: The Pragmatics, Policies, and Principles for Data Sharing in the History of the Human Genome Project.Kathryn Maxson Jones, Rachel A. Ankeny & Robert Cook-Deegan - 2018 - Journal of the History of Biology 51 (4):693-805.
    The Bermuda Principles for DNA sequence data sharing are an enduring legacy of the Human Genome Project. They were adopted by the HGP at a strategy meeting in Bermuda in February of 1996 and implemented in formal policies by early 1998, mandating daily release of HGP-funded DNA sequences into the public domain. The idea of daily sharing, we argue, emanated directly from strategies for large, goal-directed molecular biology projects first tested within the “community” of C. elegans researchers, and were introduced (...)
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   9 citations  
  • Are humans disturbing conditions in ecology?S. Andrew Inkpen - 2017 - Biology and Philosophy 32 (1):51-71.
    In this paper I argue, first, that ecologists have routinely treated humans—or more specifically, anthropogenic causal factors—as disturbing conditions. I define disturbing conditions as exogenous variables, variables “outside” a model, that when present in a target system, inhibit the applicability or accuracy of the model. This treatment is surprising given that humans play a dominant role in many ecosystems and definitions of ecology contain no fundamental distinction between human and natural. Second, I argue that the treatment of humans as disturbing (...)
    Direct download (2 more)  
     
    Export citation  
     
    Bookmark   9 citations  
  • From the genetic to the computer program: the historicity of 'data' and 'computation' in the investigations on the nematode worm C. elegans (1963–1998). [REVIEW]Miguel García-Sancho - 2012 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 43 (1):16-28.
  • From the genetic to the computer program: the historicity of ‘data’ and ‘computation’ in the investigations on the nematode worm C. elegans.Miguel García-Sancho - 2012 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 43 (1):16-28.
    No categories
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   3 citations  
  • Sins of Inquiry: How to Criticize Scientific Pursuits.Marina DiMarco & Kareem Khalifa - 2022 - Studies in History and Philosophy of Science Part A 92 (C):86-96.
    Criticism is a staple of the scientific enterprise and of the social epistemology of science. Philosophical discussions of criticism have traditionally focused on its roles in relation to objectivity, confirmation, and theory choice. However, attention to criticism and to criticizability should also inform our thinking about scientific pursuits: the allocation of resources with the aim of developing scientific tools and ideas. In this paper, we offer an account of scientific pursuitworthiness which takes criticizability as its starting point. We call this (...)
    Direct download (5 more)  
     
    Export citation  
     
    Bookmark   3 citations  
  • Model Organisms Unbound.Angela N. H. Creager - 2022 - Journal of the History of Biology 55 (1):21-28.
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark  
  • Introduction: What Right? Which Organisms? Why Jobs?Brad Bolman - 2022 - Journal of the History of Biology 55 (1):3-13.
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   1 citation  
  • Dogs for Life: Beagles, Drugs, and Capital in the Twentieth Century.Brad Bolman - 2022 - Journal of the History of Biology 55 (1):147-179.
    This article tracks the transformation of beagle dogs from a common breed in mid-twentieth century American laboratories to the de jure standard in global toxicological research by the turn of the twenty-first. The breed was dispersed widely due to the expanding use of dogs in pharmacology in the 1950s and a worldwide crisis around pharmaceutical safety following the thalidomide scandal of the 1960s. Nevertheless, debates continued for decades over the beagle’s value as a model of carcinogenicity, even as the dogs (...)
    Direct download (3 more)  
     
    Export citation  
     
    Bookmark   3 citations  
  • What’s so special about model organisms?Rachel A. Ankeny & Sabina Leonelli - 2011 - Studies in History and Philosophy of Science Part A 42 (2):313-323.
    This paper aims to identify the key characteristics of model organisms that make them a specific type of model within the contemporary life sciences: in particular, we argue that the term “model organism” does not apply to all organisms used for the purposes of experimental research. We explore the differences between experimental and model organisms in terms of their material and epistemic features, and argue that it is essential to distinguish between their representational scope and representational target. We also examine (...)
    Direct download (5 more)  
     
    Export citation  
     
    Bookmark   113 citations  
  • Repertoires: A post-Kuhnian perspective on scientific change and collaborative research.Rachel A. Ankeny & Sabina Leonelli - 2016 - Studies in History and Philosophy of Science Part A 60:18-28.
  • Making Organisms Model Human Behavior: Situated Models in North-American Alcohol Research, since 1950.Rachel A. Ankeny, Sabina Leonelli, Nicole C. Nelson & Edmund Ramsden - 2014 - Science in Context 27 (3):485-509.
    ArgumentWe examine the criteria used to validate the use of nonhuman organisms in North-American alcohol addiction research from the 1950s to the present day. We argue that this field, where the similarities between behaviors in humans and non-humans are particularly difficult to assess, has addressed questions of model validity by transforming the situatedness of non-human organisms into an experimental tool. We demonstrate that model validity does not hinge on the standardization of one type of organism in isolation, as often the (...)
    No categories
    Direct download (5 more)  
     
    Export citation  
     
    Bookmark   10 citations  
  • Scientific Coordination beyond the A Priori: A Three-dimensional Account of Constitutive Elements in Scientific Practice.Michele Luchetti - 2020 - Dissertation, Central European University
    In this dissertation, I present a novel account of the components that have a peculiar epistemic role in our scientific inquiries, since they contribute to establishing a form of coordination. The issue of coordination is a classic epistemic problem concerning how we justify our use of abstract conceptual tools to represent concrete phenomena. For instance, how could we get to represent universal gravitation as a mathematical formula or temperature by means of a numerical scale? This problem is particularly pressing when (...)
    Direct download  
     
    Export citation  
     
    Bookmark