This essay offers a conception of logic by which logic may be considered to be exceptional among the sciences on the backdrop of a naturalistic outlook. The conception of logic focused on emphasises the traditional role of logic as a methodology for the sciences, which distinguishes it from other sciences that are not methodological. On the proposed conception, the methodological aims of logic drive its definitions and principles, rather than the description of scientific phenomena. The notion of a methodological discipline (...) is explained as a relation between disciplines or practices. Logic serves as a methodological discipline with respect to any theoretical practice, and this generality, as well as logic’s reflexive nature, distinguish it from other methodological disciplines. Finally, the evolution of model theory is taken as a case study, with a focus on its methodological role. Following recent work by John Baldwin and Juliette Kennedy, we look at model theory from its inception in the mid-twentieth century as a foundational endeavour until developments at the end of the century, where the classification of theories has taken centre-stage. (shrink)