Waddington redux: models and explanation in stem cell and systems biology
Biology and Philosophy 27 (2):179-213 (2012)
Abstract
Stem cell biology and systems biology are two prominent new approaches to studying cell development. In stem cell biology, the predominant method is experimental manipulation of concrete cells and tissues. Systems biology, in contrast, emphasizes mathematical modeling of cellular systems. For scientists and philosophers interested in development, an important question arises: how should the two approaches relate? This essay proposes an answer, using the model of Waddington’s landscape to triangulate between stem cell and systems approaches. This simple abstract model represents development as an undulating surface of hills and valleys. Originally constructed by C. H. Waddington to visually explicate an integrated theory of genetics, development and evolution, the landscape model can play an updated unificatory role. I examine this model’s structure, representational assumptions, and uses in all three contexts, and argue that explanations of cell development require both mathematical models and concrete experiments. On this view, the two approaches are interdependent, with mathematical models playing a crucial but circumscribed role in explanations of cell developmentDOI
10.1007/s10539-011-9294-y
My notes
Similar books and articles
Social experiments in stem cell biology.Melinda B. Fagan - 2011 - Perspectives on Science 19 (3):235-262.
Systems bioethics and stem cell biology.Jason Scott Robert, Jane Maienschein & Manfred D. Laubichler - 2006 - Journal of Bioethical Inquiry 3 (1-2):19-31.
Diagrams as locality aids for explanation and model construction in cell biology.Nicholaos Jones & Olaf Wolkenhauer - 2012 - Biology and Philosophy 27 (5):705-721.
International society for stem cell research (ISSCR) guidelines for the conduct of human embryonic stem cell research (december 2006).Bernard Dickens - unknown
Stem cell research: An ethical evaluation of policy options.Nikolaus Knoepffler - 2004 - Kennedy Institute of Ethics Journal 14 (1):55-74.
Integrating sciences by creating new disciplines: The case of cell biology. [REVIEW]William Bechtel - 1993 - Biology and Philosophy 8 (3):277-299.
Epigenetic landscaping: Waddington's use of cell fate bifurcation diagrams. [REVIEW]Scott F. Gilbert - 1991 - Biology and Philosophy 6 (2):135-154.
Moral complicity in induced pluripotent stem cell research.Mark T. Brown - 2009 - Kennedy Institute of Ethics Journal 19 (1):pp. 1-22.
The Ethics of Moral Compromise for Stem Cell Research Policy.Zubin Master & G. K. D. Crozier - 2012 - Health Care Analysis 20 (1):50-65.
Broadening the scope of debates around stem cell research.Tamra Lysaght & Alastair V. Campbell - 2013 - Bioethics 27 (5):251-256.
Allowing Innovative Stem Cell-Based Therapies Outside of Clinical Trials: Ethical and Policy Challenges.Insoo Hyun - 2010 - Journal of Law, Medicine and Ethics 38 (2):277-285.
Assessing the Risk of Ovarian Hyperstimulation Syndrome in Egg Donation: Implications for Human Embryonic Stem Cell Research.Brooke Ellison & Jaymie Meliker - 2011 - American Journal of Bioethics 11 (9):22-30.
Analytics
Added to PP
2011-10-04
Downloads
75 (#163,076)
6 months
1 (#450,425)
2011-10-04
Downloads
75 (#163,076)
6 months
1 (#450,425)
Historical graph of downloads
Citations of this work
Systems biology and the integration of mechanistic explanation and mathematical explanation.Ingo Brigandt - 2013 - Studies in History and Philosophy of Biological and Biomedical Sciences 44 (4):477-492.
Evolutionary Developmental Biology and the Limits of Philosophical Accounts of Mechanistic Explanation.Ingo Brigandt - 2015 - In P.-A. Braillard & C. Malaterre (eds.), Explanation in Biology: An Enquiry into the Diversity of Explanatory Patterns in the Life Sciences. Springer. pp. 135–173.
Explanatory Integration Challenges in Evolutionary Systems Biology.Sara Green, Melinda Fagan & Johannes Jaeger - 2015 - Biological Theory 10 (1):18-35.
Genidentity and Biological Processes.Thomas Pradeu - 2018 - In Daniel J. Nicholson & John Dupre (eds.), Everything Flows: Towards a Processual Philosophy of Biology. Oxford University Press.
Systems Biology and Mechanistic Explanation.Ingo Brigandt, Sara Green & Maureen O'Malley - 2018 - In Stuart Glennan & Phyllis McKay Illari (eds.), The Routledge Handbook of Mechanisms and Mechanical Philosophy. New York: Routledge. pp. 362–374.
References found in this work
Explaining the Brain: Mechanisms and the Mosaic Unity of Neuroscience.Carl F. Craver - 2007 - Oxford University Press, Clarendon Press.
Thinking about mechanisms.Peter Machamer, Lindley Darden & Carl F. Craver - 2000 - Philosophy of Science 67 (1):1-25.
Explanation: a mechanist alternative.William Bechtel & Adele Abrahamsen - 2005 - Studies in History and Philosophy of Biological and Biomedical Sciences 36 (2):421-441.
Evolution in Four Dimensions: Genetic, Epigenetic, Behavioral, and Symbolic Variation in the History of Life.Eva Jablonka, Marion J. Lamb & Anna Zeligowski - 2005 - Bradford.
Rethinking mechanistic explanation.Stuart Glennan - 2002 - Proceedings of the Philosophy of Science Association 2002 (3):S342-353.