The Plant Ontology (PO) is a community resource consisting of standardized terms, definitions, and logical relations describing plant structures and development stages, augmented by a large database of annotations from genomic and phenomic studies. This paper describes the structure of the ontology and the design principles we used in constructing PO terms for plant development stages. It also provides details of the methodology and rationale behind our revision and expansion of the PO to cover development stages for all plants, particularly (...) the land plants (bryophytes through angiosperms). As a case study to illustrate the general approach, we examine variation in gene expression across embryo development stages in Arabidopsis and maize, demonstrating how the PO can be used to compare patterns of expression across stages and in developmentally different species. Although many genes appear to be active throughout embryo development, we identified a small set of uniquely expressed genes for each stage of embryo development and also between the two species. Evaluating the different sets of genes expressed during embryo development in Arabidopsis or maize may inform future studies of the divergent developmental pathways observed in monocotyledonous versus dicotyledonous species. The PO and its annotation databasemake plant data for any species more discoverable and accessible through common formats, thus providing support for applications in plant pathology, image analysis, and comparative development and evolution. (shrink)
In this study we seek to determine whether catastrophic events lead to corporate charitable giving unrelated to levels of firm profitability. We examine the issue relative to the corporate philanthropic response to the 9/11 terrorist attacks of 2001. Based on a sample of 489 Fortune 500 companies, we find that differences in the extent of corporate contributions following 9/11 are positively and significantly associated with differences in firms' profitability. Further, while the degree of connection to the catastrophic event led to (...) higher levels of giving in comparison to the contributions of less connected firms, differences in the extent of philanthropy are still␣related to short-term profitability for the more connected firms. The study thus provides evidence suggesting that even in the wake of catastrophic events, corporate philanthropic giving is constrained by economic concerns. (shrink)
This article explores and critically assesses the metaxological account of a philosophy of God professed by William Desmond. Postmodern reflection on the philosophy of God has a tendency to focus on the 'signs' of God and urges for a passive acceptance of these signs. Desmond argues, contrary to this tendency, for a mindful togetherness of philosophical activity and religious passivity. After exploring Desmond's thought on this topic, I move to assess his 'metaxological yes' to God as the agapeic origin (...) from an existential point of view. Initially it seems that his 'yes' is somewhat strained as it burdens itself with an excessive task of having faith into something that is beyond determination. I illustrate this insight by referring to Friedrich Nietzsche’s 'Thus Spoke Zarathustra.' Nietzsche's existential 'No' toward transcendence is a consequence of a mindful confrontation with the excesses as play. (shrink)
William Desmond has come to be known over the last few decades as an important interlocutor in debates about the history of philosophy, metaphysics, philosophy of religion and aesthetics. His more...
William Desmond has come to be known over the last few decades as an important interlocutor in debates about the history of philosophy, metaphysics, philosophy of religion and aesthetics. His more...
On 29 March 1744, Thomasin Grace, a 13-year-old girl, was the first inpatient admitted to the Northampton General Infirmary (later the Northampton General Hospital). Inpatient hospital diets, then and now, are mainstays of effective patient treatment. In the mid-18th century there were four prescribed diets at Northampton: ‘full’, ‘milk’, ‘dry’ and ‘low’. Previous opinions concerning these four diets were unfavourable, but had not been based upon an individual dietetic assessment. Thomasin would most likely have been given the milk diet, but (...) use of the full diet cannot be excluded. ‘Grace Everyman’ is Thomasin's modern equivalent. Under current NHS guidelines Thomasin would be considered a paediatric patient, but in 1744 she would have been considered as an adult. This study undertakes a full dietetic analysis of all the prescribed diets available for Thomasin in 1744 and compares this against random choices for Grace from the 2009 inpatient menu from the paediatric (Paddington) ward, and the adult ward inpatient menu at the Northampton General Hospital. The results show that, for Thomasin, the 1744 milk and full diets met the current advised nutritional requirements for adequate dietary intake. However, for Grace, the present 2009 Paddington and adult ward menu, although generally meeting nutritional requirements, could, if Grace or her carer consistently chose poorly during a prolonged inpatient stay, lead to inadequate nutrition. This challenges assumptions that hospital diets were historically inadequate, and that choice in present day equates with satisfactory nutritional intake. (shrink)
The recent publication of twenty European travel journals originally written in the nineteenth century by William Maclure, the sometime ‘father of American geology’, has entailed major revisions in our understanding of their author. In the present essay I review geological portions of all twenty journals, integrating their contents with Maclure's already known but never before comprehensively discussed publications, which now appear in a new perspective. I then suggest a more adequate evaluation of Maclure's significance within a considerably revised schematization (...) of the history of early American geology. (shrink)
Perhaps no name is more clearly associated with the formulation of American psychology than that of William James. Yet, one of James’s last published works, A Pluralistic Universe, is little known and rarely cited in the discipline. On the 100th anniversary of the publication of this book, the authors of this special issue of The Journal of Mind and Behavior explore the past, present, and future legacy of the provocative ideas contained in this volume for psychology, including the history (...) of psychology, scientific fragmentation and ethics, the philosophy of science, psychological methods and theories, the psychology of religion, the multicultural movement, and the path of psychology in general. (shrink)
In _The Search for Meaning: A Short History, _Dennis Ford explores eight approaches human beings have pursued over time to invest life with meaning and to infuse order into a seemingly chaotic universe. These include myth, philosophy, science, postmodernism, pragmatism, archetypal psychology, metaphysics, and naturalism. In engaging, companionable prose, Ford boils down these systems to their bare essentials, showing the difference between viewing the world from a religious point of view and that of a naturalist, and comparing a scientific worldview (...) to a philosophical one. Ford investigates the contributions of the Greeks, Kant, and William James, and brings the discussion up to date with contemporary thinkers. He proffers the refreshing idea that in today's world, the answers provided by traditional religions to increasingly difficult questions have lost their currency for many and that the reductive or rationalist answers provided by science and postmodernism are themselves rife with unexamined assumptions. (shrink)
In _The Search for Meaning: A Short History, _Dennis Ford explores eight approaches human beings have pursued over time to invest life with meaning and to infuse order into a seemingly chaotic universe. These include myth, philosophy, science, postmodernism, pragmatism, archetypal psychology, metaphysics, and naturalism. In engaging, companionable prose, Ford boils down these systems to their bare essentials, showing the difference between viewing the world from a religious point of view and that of a naturalist, and comparing a scientific worldview (...) to a philosophical one. Ford investigates the contributions of the Greeks, Kant, and William James, and brings the discussion up to date with contemporary thinkers. He proffers the refreshing idea that in today's world, the answers provided by traditional religions to increasingly difficult questions have lost their currency for many and that the reductive or rationalist answers provided by science and postmodernism are themselves rife with unexamined assumptions. (shrink)
We have developed a new method to assess the movement of particles in different steps of a well-calibrated sequential kinematic restoration. Calibration included correct assessment of amounts of overburden, sedimentation, erosion, and thermal behavior through time. Our method allowed a better understanding of the mechanisms of deformation and uplift in different geologic provinces. In our pilot case study in the Colombian Eastern Cordillera, we have used movement vectors in balanced cross sections to document an initial phase of dominant vertical uplift (...) and a final phase of dominant tangential horizontal shortening. Our findings challenged the common assumptions related to folding and deformation mechanisms in fold-and-thrust belts used for cross-section balancing and palinspastic reconstructions. Thus, we found that the movement vectors in cross sections can be used to test and validate a complete procedure to obtain calibrated sequential kinematic restorations and represent a powerful tool to better understand deformation mechanisms in different settings. (shrink)
