Results for 'Justin Preece'

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  1. Ontologies as Integrative Tools for Plant Science.Ramona Walls, Balaji Athreya, Laurel Cooper, Justin Elser, Maria A. Gandolfo, Pankaj Jaiswal, Christopher J. Mungall, Justin Preece, Stefan Rensing, Barry Smith & Dennis W. Stevenson - 2012 - American Journal of Botany 99 (8):1263–1275.
    Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregation of data and a semantic framework for automated analyses and reasoning. They are a key component of the Semantic Web. This paper provides background on what bio-ontologies are, why they are relevant to botany, and the principles of ontology development. It includes an overview of ontologies and related resources that are relevant to plant science, (...)
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  2. The Plant Ontology as a tool for comparative plant anatomy and genomic analyses.Cooper Laurel, Walls Ramona, L. Elser, Justin Gandolfo, A. Maria, Stevenson Dennis, W. Smith, Barry Preece, Justin Athreya, Balaji Mungall, J. Christopher, Rensing Stefan & Others - 2012 - Plant and Cell Physiology.
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  3. The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Laurel Cooper, Austin Meier, Marie-Angélique Laporte, Justin L. Elser, Chris Mungall, Brandon T. Sinn, Dario Cavaliere, Seth Carbon, Nathan A. Dunn, Barry Smith, Botong Qu, Justin Preece, Eugene Zhang, Sinisa Todorovic, Georgios Gkoutos, John H. Doonan, Dennis W. Stevenson, Elizabeth Arnaud & Pankaj Jaiswal - 2018 - Nucleic Acids Research 46 (D1):D1168–D1180.
    The Planteome project provides a suite of reference and species-specific ontologies for plants and annotations to genes and phenotypes. Ontologies serve as common standards for semantic integration of a large and growing corpus of plant genomics, phenomics and genetics data. The reference ontologies include the Plant Ontology, Plant Trait Ontology, and the Plant Experimental Conditions Ontology developed by the Planteome project, along with the Gene Ontology, Chemical Entities of Biological Interest, Phenotype and Attribute Ontology, and others. The project also provides (...)
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  4. Explaining Loss of Standing to Blame.Justin Snedegar - 2023 - Journal of Moral Philosophy 21 (3-4):404-432.
    Both in everyday life and in moral philosophy, many think that our own past wrongdoing can undermine our standing to indignantly blame others for similar wrongdoing. In recent literature on the ethics of blame, we find two different kinds of explanation for this. Relative moral status accounts hold that to have standing to blame, you must be better than the person you are blaming, in terms of compliance with the norm. Fault-based accounts hold that those who blame others for things (...)
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  5.  56
    Dynamics and Diversity in Epistemic Communities.Cailin O’Connor & Justin Bruner - 2019 - Erkenntnis 84 (1):101-119.
    Bruner shows that in cultural interactions, members of minority groups will learn to interact with members of majority groups more quickly—minorities tend to meet majorities more often as a brute fact of their respective numbers—and, as a result, may come to be disadvantaged in situations where they divide resources. In this paper, we discuss the implications of this effect for epistemic communities. We use evolutionary game theoretic methods to show that minority groups can end up disadvantaged in academic interactions like (...)
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  6.  39
    Divine Machines: Leibniz and the Sciences of Life.Justin E. H. Smith - 2011 - Princeton University Press.
    Though it did not yet exist as a discrete field of scientific inquiry, biology was at the heart of many of the most important debates in seventeenth-century philosophy. Nowhere is this more apparent than in the work of G. W. Leibniz. In Divine Machines, Justin Smith offers the first in-depth examination of Leibniz's deep and complex engagement with the empirical life sciences of his day, in areas as diverse as medicine, physiology, taxonomy, generation theory, and paleontology. He shows how (...)
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  7. How to Solve the Problem of Evil: A Deontological Strategy.Justin Mooney - 2019 - Faith and Philosophy 36 (4):442-462.
    One paradigmatic argument from evil against theism claims that, (1) if God exists, then there is no gratuitous evil. But (2) there is gratuitous evil, so (3) God does not exist. I consider three deontological strategies for resisting this argument. Each strategy restructures existing theodicies which deny (2) so that they instead deny (1). The first two strategies are problematic on their own, but their primary weaknesses vanish when they are combined to form the third strategy, resulting in a promising (...)
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  8. The Matter of Coincidence.Justin Mooney - 2024 - Pacific Philosophical Quarterly 105 (1):98-114.
    The phasalist solution to the puzzle of the statue and the piece of clay claims that being a statue is a phase sortal property of the piece of clay, just like being a child is a phase sortal property of a human being. Some philosophers reject this solution because it cannot account for cases where the statue seems to gain and lose parts that the piece of clay does not. I rebut this objection by arguing, contrary to the prevailing view, (...)
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  9.  75
    Nietzsche's Constructivism: A Metaphysics of Material Objects.Justin Remhof - 2017 - New York: Routledge.
    Like Kant, the German Idealists, and many neo-Kantian philosophers before him, Nietzsche was persistently concerned with metaphysical questions about the nature of objects. His texts often address questions concerning the existence and non-existence of objects, the relation of objects to human minds, and how different views of objects significantly impact various commitments in many areas of philosophy—not just metaphysics, but also semantics, epistemology, science, logic and mathematics, and even ethics. This book presents a systematic and comprehensive analysis of Nietzsche’s material (...)
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  10. A Diversified Approach to Fission Puzzles.Justin Mooney - forthcoming - Journal of Philosophy.
    I introduce a new approach to fission puzzles called the Diversified Approach that proceeds by distinguishing different kinds of fission and assimilating each kind to a different ordinary phenomenon, such as breaking apart, replication, or part loss. To illustrate this approach, I apply it to the case of amoebic fission. The upshot is a novel account of amoebic fission according to which the dividing amoeba ceases to exist because it breaks apart. After developing this solution and highlighting some of its (...)
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  11. Artificial Intelligence and Neuroscience Research: Theologico-Philosophical Implications for the Christian Notion of the Human Person.Justin Nnaemeka Onyeukaziri - 2023 - Maritain Studies/Etudes Maritainiennes 39:85-103.
    This paper explores the theological and philosophical implications of artificial intelligence (AI) and Neuroscience research on the Christian’s notion of the human person. The paschal mystery of Christ is the intuitive foundation of Christian anthropology. In the intellectual history of the Christianity, Platonism and Aristotelianism have been employed to articulate the Christian philosophical anthropology. The Aristotelian systematization has endured to this era. Since the modern period of the Western intellectual history, Aristotelianism has been supplanted by the positive sciences as the (...)
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  12. On the View that People and Not Institutions Bear Primary Credit for Success in Governance: Confucian Arguments.Justin Tiwald - 2019 - Journal of Confucian Philosophy and Culture 32:65-97.
    This paper explicates the influential Confucian view that “people” and not “institutional rules” are the proper sources of good governance and social order, as well as some notable Confucian objections to this position. It takes Xunzi 荀子, Hu Hong 胡宏, and Zhu Xi 朱熹 as the primary representatives of the “virtue-centered” position, which holds that people’s good character and not institutional rules bear primary credit for successful governance. And it takes Huang Zongxi 黃宗羲 as a major advocate for the “institutionalist” (...)
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  13.  44
    Epistemic risks in cancer screening: Implications for ethics and policy.Justin B. Biddle - 2020 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 79:101200.
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  14.  37
    Moral Psychology: Heartmind (Xin), Nature (Xing), and Emotions (Qing).Stephen C. Angle & Justin Tiwald - 2020 - In Kai-Chiu Ng & Yong Huang (eds.), Dao Companion to Zhu Xi’s Philosophy. Springer. pp. 361-387.
    An overview of Zhu Xi's moral psychology, with a special focus on the metaphysical underpinnings and the relations between heartmind (xin), emotions (qing), and nature (xing). The authors explain how Zhu uses his account to balance the demand for independent standards of assessment with his commitment to ethical norms that virtuous agents can embrace wholeheartedly.
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  15.  12
    Dual-Task Interference on Early and Late Stages of Facial Emotion Detection Is Revealed by Human Electrophysiology.Amélie Roberge, Justin Duncan, Daniel Fiset & Benoit Brisson - 2019 - Frontiers in Human Neuroscience 13.
  16.  78
    Strict moral liability.Justin Capes - 2019 - Social Philosophy and Policy 36 (1):52-71.
    :Strict liability in tort law is thought by some to have a moral counterpart. In this essay I attempt to determine whether there is, in fact, strict liability in the moral domain. I argue that there is, and I critically evaluate several accounts of its normative foundations before suggesting one of my own.
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  17.  33
    Why Would Anyone Believe in God?Justin L. Barrett - 2004 - Lanham MD: AltaMira Press.
    Using the latest cognitive and psychological scientific data and theory, this book answers the question "why would anyone believe in God?".
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  18.  24
    The Adaptive Logic of Moral Luck.Justin W. Martin & Fiery Cushman - 2016 - In Wesley Buckwalter & Justin Sytsma (eds.), Blackwell Companion to Experimental Philosophy. Malden, MA: Blackwell. pp. 190–202.
    Moral luck is a puzzling aspect of our psychology: Why do we punish outcomes that were not intended (i.e. accidents)? Prevailing psychological accounts of moral luck characterize it as an accident or error, stemming either from a re‐evaluation of the agent's mental state or from negative affect aroused by the bad outcome itself. While these models have strong evidence in their favor, neither can account for the unique influence of accidental outcomes on punishment judgments, compared with other categories of moral (...)
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  19.  11
    Introduction: The Semantics of Imagination.Kristina Liefke & Justin D’Ambrosio - forthcoming - Topoi:1-7.
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  20. Moral character.Geoffrey P. Goodwin & Justin F. Landy - 2021 - In Bertram F. Malle & Philip Robbins (eds.), The Cambridge Handbook of Moral Psychology. Cambridge, United Kingdom: Cambridge University Press.
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  21.  77
    You Can’t Have Your Steak and Call for Political Action on Climate Change, Too.Justin Bernstein - forthcoming - Journal of Value Inquiry:1-21.
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  22.  14
    Brill's Companion to the Reception of Presocratic Natural Philosophy in Later Classical Thought.Chelsea C. Harry & Justin Habash (eds.) - 2020 - Boston: BRILL.
    _Brill's Companion to the Reception of Presocratic Natural Philosophy in Later Classical Thought_ explores both explicit and hidden influences of Presocratic (6-4th c. BCE) early scientific concepts, such as nature, elements, principles, soul, organization, causation, purpose, and cosmos in Platonic, Aristotelian, and Hippocratic philosophy.
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  23. The ethics–mathematics analogy.Justin Clarke-Doane - 2019 - Philosophy Compass 15 (1):e12641.
    Ethics and mathematics have long invited comparisons. On the one hand, both ethical and mathematical propositions can appear to be knowable a priori, if knowable at all. On the other hand, mathematical propositions seem to admit of proof, and to enter into empirical scientific theories, in a way that ethical propositions do not. In this article, I discuss apparent similarities and differences between ethical (i.e., moral) and mathematical knowledge, realistically construed -- i.e., construed as independent of human mind and languages. (...)
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  24. What's wrong with exploitation?Justin Schwartz - 1995 - Noûs 29 (2):158-188.
    Marx thinks that capitalism is exploitative, and that is a major basis for his objections to it. But what's wrong with exploitation, as Marx sees it? (The paper is exegetical in character: my object is to understand what Marx believed,) The received view, held by Norman Geras, G.A. Cohen, and others, is that Marx thought that capitalism was unjust, because in the crudest sense, capitalists robbed labor of property that was rightfully the workers' because the workers and not the capitalists (...)
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  25. Defending Nietzsche's Constructivism about Objects.Justin Remhof - 2017 - European Journal of Philosophy 25 (2):1132-1158.
    Nietzsche appears to adopt a radical Kantian view of objects called constructivism, which holds that the existence of all objects depends essentially on our practices. This essay provides a new reconstruction of Nietzsche's argument for constructivism and responds to five pressing objections to reading Nietzsche as a constructivist that have not been addressed by commentators defending constructivist interpretations of Nietzsche.
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  26. (1 other version)Wrong Kinds of Reason and the Opacity of Normative Force.Justin D’Arms & Daniel Jacobson - 2010 - In Russ Shafer-Landau (ed.), Oxford Studies in Metaethics. Oxford: Oxford University Press. pp. 215-244.
     
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  27. Multiple reductions revisited.Justin Clarke-Doane - 2008 - Philosophia Mathematica 16 (2):244-255.
    Paul Benacerraf's argument from multiple reductions consists of a general argument against realism about the natural numbers (the view that numbers are objects), and a limited argument against reductionism about them (the view that numbers are identical with prima facie distinct entities). There is a widely recognized and severe difficulty with the former argument, but no comparably recognized such difficulty with the latter. Even so, reductionism in mathematics continues to thrive. In this paper I develop a difficulty for Benacerraf's argument (...)
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  28. Libertarianism and agentive experience.Justin A. Capes - 2023 - Philosophical Issues 33 (1):33-44.
    Libertarianism about free will conjoins the thesis that free will requires indeterminism with the thesis that we have free will. Here the claim that we have experiential evidence for the libertarian position is assessed. It is argued that, on a straightforward reading, the claim is false, for our experiences as agents don't support the claim that free will requires indeterminism. However, our experiences as agents may still have a role to play in an overall case for libertarianism, insofar as they (...)
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  29.  31
    The problem of mooted models for analyses of microbiome causality.Justin Donhauser, Sara Worley, Michael Bradie & Juan L. Bouzat - 2019 - Biology and Philosophy 34 (6):57.
    Lynch, Parke, and O’Malley highlight the need for better evaluative criteria for causal explanations in microbiome research. They propose new interventionist criteria, show that paradigmatic examples of microbiome explanations are flawed using those criteria, and suggest numerous ways microbiome explanations can be improved. While we endorse their primary criticisms and suggestions for improvements in microbiome research, we make several observations regarding the use of mooted causal models in microbiome research that have significant implications for their overall argument. In sum, we (...)
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  30.  31
    Exploring the social bases of home gardening.Justin L. Schupp & Jeff S. Sharp - 2012 - Agriculture and Human Values 29 (1):93-105.
    The study of alternatives to conventional industrial agricultural production has intensified in recent years. While many types of alternative production systems, and the motivations of individuals to participate in them, have been studied, there are significant gaps in the literature. One such dearth is research on those participating in self-provisioning activities. This study begins to fill the gap by looking at the self-provisioning activity of home gardening using data from the 2008 Ohio Survey of Food, Agriculture, and Environmental Issues. Discerning (...)
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  31. Kant’s Transcendental Idealism and his Transcendental Deduction.Justin B. Shaddock - 2015 - Kantian Review 20 (2):265-288.
    I argue for a novel, non-subjectivist interpretation of Kant’s transcendental idealism. Kant’s idealism is often interpreted as specifying how we must experience objects or how objects must appear to us. I argue to the contrary by appealing to Kant’s Transcendental Deduction. Kant’s Deduction is the proof that the categories are not merely subjectively necessary conditions we need for our cognition, but objectively valid conditions necessary for objects to be appearances. My interpretation centres on two claims. First, Kant’s method of self-knowledge (...)
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  32.  20
    St Augustine: Confessions.J. J. H., Justin Lovell & Enoch Powell - 1996 - Philosophical Quarterly 46 (183):280.
  33.  46
    Robert Audi, Moral Knowledge and Ethical Character:Moral Knowledge and Ethical Character.Justin D'Arms - 1999 - Ethics 109 (3):645-648.
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  34.  3
    Exploring the Postsecular : The Religious, the Political and the Urban.Arie L. Molendijk, Justin Beaumont & Christoph Jedan (eds.) - 2010 - Brill.
    This book examines contemporary relations between religion, politics and urban societies from a theoretical perspective. Special attention is paid to those authors (e.g. Habermas, Taylor) who analyze new global constellations in terms of a shift from the secular to the postsecular.
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  35.  23
    Fitting emotions and virtuous judgment.Justin D'Arms - forthcoming - Analytic Philosophy.
    I discuss a tension between two broadly Aristotelian ideas about the role of emotions in virtue and consider its implications for the original and attractive theory of virtuous judgment that Gopal Sreenivasan develops in Emotion and Virtue. One is the idea that a virtuous person has fitting emotions. The other idea is that the virtuous person has emotions that point her toward performing a virtuous action. I explain the tension between these ideas, and how it arises with respect to both (...)
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  36. Perception as Controlled Hallucination.Justin Tiehen - 2023 - Analytic Philosophy 64 (4):355-372.
    “Perception is controlled hallucination,” according to proponents of predictive processing accounts of vision. I say they are right that something like this is a consequence of their view but wrong in how they have pursued the idea. The focus of my counterproposal is the causal theory of perception, which I develop in terms of a productive concept of causation. Cases of what otherwise seem like successful perception are instead mere veridical hallucination if predictive processing accounts are correct, I argue, because (...)
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  37. Relational Sufficientarianism and Basic Income.Justin Tosi - 2019 - In Michael Cholbi & Michael Weber (eds.), The Future of Work, Technology, and Basic Income. Routledge. pp. 49-61.
    Basic income policies have recently enjoyed a great deal of discussion, but they are not a natural fit with views of distributive or social justice endorsed by many moral and political philosophers. This essay develops and defends a new view of social justice, called relational sufficientarianism, which is more compatible with a universal basic income. Relational sufficientarianism holds that persons in a just society must have sufficient social status, but not necessarily equal social status. It argues that this view offers (...)
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  38. The Choice of Economic Systems in the Rawlsian Original Position.Justin P. Holt - 2011 - Critique: Journal of Socialist Theory 3 (39):393-405.
    Rawls’s consideration not to include the choice of economic systems as part of a theory of justice is inconsistent with his comments on redistribution and the political effects of economic inequality. When Rawls’s discussion of economic systems and his discussion of economic inequalities is examined, it is apparent that the selection of economic systems is a pertinent topic for a theory of justice. The propensity for the primary social good of self-respect to be satisfied can be affected by the selection (...)
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  39. Naturalism, Causality, and Nietzsche’s Conception of Science.Justin Remhof - 2015 - Journal of Nietzsche Studies 46 (1):110-119.
    ABSTRACT There is a disagreement over how to understand Nietzsche's view of science. According to what I call the Negative View, Nietzsche thinks science should be reconceived or superseded by another discourse, such as art, because it is nihilistic. By contrast, what I call the Positive View holds that Nietzsche does not think science is nihilistic, so he denies that it should be reinterpreted or overcome. Interestingly, defenders of each position can appeal to Nietzsche's understanding of naturalism to support their (...)
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  40. Unavoidable actions.Justin A. Capes - 2023 - Philosophical Explorations 27 (1):57-73.
    ABSTRACT It’s often assumed, especially in discussions of free will and moral responsibility, that unavoidable actions are possible. In recent years, however, several philosophers have questioned that assumption. Their views are considered here, and the possibility of unavoidable actions is defended and then applied to issues in action theory and in the literature on moral responsibility.
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  41. Does rigidity matter? Constitutional entrenchment and growth.Justin Callais & Andrew T. Young - 2022 - European Journal of Law and Economics 53:27–62.
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  42.  56
    Epistemology after Sextus Empiricus.Justin Vlasits & Katja Maria Vogt (eds.) - 2020 - New York, USA: Oxford University Press.
    Sextus Empiricus was the voice of ancient Greek skepticism for posterity. His writings contain the most subtle and detailed versions of the ancient skeptical arguments known as Pyrrhonism, adding up to a distinctive philosophical approach. Instead of viewing philosophy as valuable because of the answers it gives to important questions, Sextus considered the search for answers itself to be fundamental and offered a philosophy centered on inquiry. Assuming the point of view of an active inquirer, Sextus developed arguments concerning conflicting (...)
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  43. Nietzsche on Objects.Justin Remhof - 2015 - Nietzsche Studien 44 (1).
    Nietzsche was persistently concerned with what an object is and how different views of objects lead to different views of facts, causality, personhood, substance, truth, mathematics and logic, and even nihilism. Yet his treatment of objects is incredibly puzzling. In many passages he assumes that objects such as trees and leaves, tables and chairs, and dogs and cats are just ordinary entities of experience. In other places he reports that objects do not exist. Elsewhere he claims that objects exist, but (...)
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  44. A New Logical Problem for the Doctrine of the Trinity.Justin Mooney - 2018 - Religious Studies 54 (1):1-18.
    In this article I develop a new problem for the doctrine of the Trinity that I call the Problem of Triunity. Rather than proceeding from the fact that God is one and the persons are many, as the traditional problem of the Trinity does, the problem of triunity proceeds from the fact that, in one sense or another, God is many, and yet each divine person on his own is just one.
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  45.  68
    苦死與哲學之慰藉:對Covid-19疫情的塞內卡之反思.Justin Nnaemeka Onyeukaziri - 2024 - In 中國哲學會學術專刊第六輯--「危機時代的哲學--『後』疫情時期的反思」.
    此研究的目的是論述在悲劇發生時哲學具作為慰藉手段的作用。西方哲學的羅馬希臘化時期,跨越了不同的哲學流派,蓬勃發展了一種被稱為“慰藉”(consolatione)的特殊哲學著作的文體。因此,哲學家和哲學 思想家撰寫了幾部名為“De consolatione”(On Consolation)的哲學著作,一直持續到中世紀,如波埃修斯(Boethius)的通俗著作“De Consolatione Philosophia”(On the Consolation of Philosophy)。在羅馬希臘化時期哲學家現存的著作中,塞內卡的著作可以說是最多且篇幅相當長,是寫給他所認識遭受悲劇的人的。因此,本文試圖在塞內卡的著作中探索這種特殊的哲學體裁—論慰藉。本文要探究 他如何使用這種哲學體裁來幫助遭受悲劇的人,特別是遭受親人的死亡,而獲得心靈的平靜與安寧。其目的是利用塞內卡關於“De Consolatione”的著作來反思世界各地許多遭受Covid-19 疫情帶來悲劇的人。即是證明和探索哲學思考在悲劇時的作用。這表明,哲學或哲學家不是悲劇時的無助旁觀者,而是與人類境遇具有生存相關性的活動。更具體一點,此論文的目的就是回答下面這個問題:哲學可以對超過四百 萬因爲疫情而直接死亡的人(不包括那些間接死亡的人)其遭受苦死的家人和朋友說些什麼?今天哲學家如何為因 Covid-19 疫情而遭受悲劇的人們帶來慰藉?此論文認為,哲學家塞內卡(Seneca)可以教今天的哲學家如何運用哲學作為處理當今悲劇的手段。因此,本文架構如下: 1. 塞內卡哲學的簡要闡述。 2. 論述慰藉之哲學文體。 3. 塞內卡《慰藉》著作的哲學論述。 4. 塞內卡思想對 Covid-19 疫情的反思。 5. 結論。.
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  46. The Paradox of Ideology.Justin Schwartz - 1993 - Canadian Journal of Philosophy 23 (4):543 - 574.
    A standard problem with the objectivity of social scientific theory in particular is that it is either self-referential, in which case it seems to undermine itself as ideology, or self-excepting, which seem pragmatically self-refuting. Using the example of Marx and his theory of ideology, I show how self-referential theories that include themselves in their scope of explanation can be objective. Ideology may be roughly defined as belief distorted by class interest. I show how Marx thought that natural science was informed (...)
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  47.  11
    The Poet-Saints of Maharashtra.Franklin Edgerton & Justin E. Abbott - 1930 - Journal of the American Oriental Society 50:76.
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  48. Functional explanation and metaphysical individualism.Justin Schwartz - 1993 - Philosophy of Science 60 (2):278-301.
    G. A. Cohen defends and Jon Elster criticizes Marxist use of functional explanation. But Elster's mechanical conception of explanation is, contrary to Elster's claims, a better basis for vindication of functional explanation than Cohen's nomological conception, which cannot provide an adequate account of functional explanation. Elster also objects that functional explanation commits us to metaphysically bizarre collective subjects, but his argument requires an implausible reading of methodological individualism which involves an unattractive eliminativism about social phenomena.
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  49. The W-Defense Defended.Justin A. Capes - 2024 - Ergo: An Open Access Journal of Philosophy 11.
    The W-defense is among the most prominent arguments for the principle of alternative possibilities (PAP). Here I offer some considerations in support of the W-defense and respond to what I see as the most forceful objections to it to date. My response to these objections invokes the well-known flicker of freedom response to Frankfurt cases. I argue that the W-defense and the flicker response are mutually reinforcing and together yield a compelling defense of PAP.
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  50. Bennett Helm, emotional reason: Deliberation, motivation, and the nature of value (cambridge: Cambridge university press, 2001), pp. X + 261.Justin D'arms - 2004 - Utilitas 16 (3):343-345.
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