Reuse of elements from existing ontologies in the construction of new ontologies is a foundational principle in ontological design. It offers the benefits, among others, of consistency and interoperability between such knowledge structures as well as sharing resources. Reuse is widely found within important collections of established ontologies, such as BioPortal and the OBO Foundry. However, reuse comes with its own potential problems involving ontological commitment, granularity, and ambiguity. Guidelines are proposed to aid ontology developers and curators in their prospective (...) reuse of content. These guidelines have been gleaned over years of practice in the ontology field. The guidelines are couched in experiential reports on designing and curating particular ontologies (e.g., EXACT and EXACT2) and using generally accepted approaches (e.g., MIREOT) in doing so. Various software tools to assist in ontology reuse are surveyed and discussed. (shrink)

The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...) existing databases, building data entry forms, and enabling interoperability between knowledge resources. OBI covers all phases of the investigation process, such as planning, execution and reporting. It represents information and material entities that participate in these processes, as well as roles and functions. Prior to OBI, it was not possible to use a single internally consistent resource that could be applied to multiple types of experiments for these applications. OBI has made this possible by creating terms for entities involved in biological and medical investigations and by importing parts of other biomedical ontologies such as GO, Chemical Entities of Biological Interest (ChEBI) and Phenotype Attribute and Trait Ontology (PATO) without altering their meaning. OBI is being used in a wide range of projects covering genomics, multi-omics, immunology, and catalogs of services. OBI has also spawned other ontologies (Information Artifact Ontology) and methods for importing parts of ontologies (Minimum information to reference an external ontology term (MIREOT)). The OBI project is an open cross-disciplinary collaborative effort, encompassing multiple research communities from around the globe. To date, OBI has created 2366 classes and 40 relations along with textual and formal definitions. The OBI Consortium maintains a web resource providing details on the people, policies, and issues being addressed in association with OBI. (shrink)

The basis of science is the hypothetico-deductive method and the recording of experiments in sufficient detail to enable reproducibility. We report the development of Robot Scientist "Adam," which advances the automation of both. Adam has autonomously generated functional genomics hypotheses about the yeast Saccharomyces cerevisiae and experimentally tested these hypotheses by using laboratory automation. We have confirmed Adam's conclusions through manual experiments. To describe Adam's research, we have developed an ontology and logical language. The resulting formalization involves over 10,000 different (...) research units in a nested treelike structure, 10 levels deep, that relates the 6.6 million biomass measurements to their logical description. This formalization describes how a machine contributed to scientific knowledge. (shrink)

The article analyzes the interdisciplinary methodology of city research within the philosophical and cultural approach. The authors argue that at present, besides sociological and economic approaches to the interpretation of the city, the cultural and philosophical examination of city is of special interest. It combines both theoretical issues and the practical aspects. The authors present the philosophical and cultural analysis of the city as well as the general concept of chronotopia. The concept of chronotope, proposed by M. M. Bakhtin and (...) his followers, is most often used as a tool for the analysis of fiction. According to the authors, the spatio-temporal diagnostics of the city also has significant theoretical and practical potential. The authors discuss various literary and philosophical texts analyzing the feautures and evolution of the “soul of the city” (written by Russians N.P. Antsiferov, I.M. Grevs, Y.M. Lotman, M.S. Kagan, I.I. Mitin as well as by foreign scholars Y. Slezkine, K. Schlogel, exploring the chronotope of Soviet cities). The article presents other modern Russian and foreign researchers who directly collaborated with the authors of this research in joint urban projects: M. Golovanivskaya (“syntax” of urban squares), “Ural matrix” (A. Ivanov, I. Lisovets, E. Trubina), chronotope of a small Israeli city (E. Rimon), Stanford chronotopes (J. Bender, D.E. Wellbery). Since the city, like any cultural phenomenon, manifests itself within a set of spatio-temporal coordinates, the chronotope can be considered as the basic tool for its philosophical and cultural interpretation. The article substantiates the practical aspects of applying chronotopia to the analysis of the city: chronotopes of the past and everyday life in cities of certain types, strategic opportunities and boundaries of the chronotopes of a given city. The authors concludes that the chro-notopia of city is a transdisciplinary field in the cultural and philosophical studies of the city. (shrink)

Commentary on the Sāṅkhyakārikā of Īśvarakr̥ṣṇa, compendium of the Sāṅkhya school in Hindu philosophy.

First-2d ed. published under title: Manual de introduccion a la ciencia del derecho.

A más de cien años de su nacimiento y casi treinta de su muerte, Paul Grice sigue siendo uno de los filósofos más citados, discutidos e incomprendidos del siglo xx. Innovador, desafiante e inconforme intelectualmente, parece haber llevado a cabo uno de los anhelos más profundos de la filosofía oxoniense del lenguaje ordinario: transformar la reflexión sobre el lenguaje en una reflexión sobre la acción humana. El libro argumenta a favor de esta tesis señalando cómo algunos problemas específicos de la (...) filosofía del lenguaje de Grice sólo pueden ser tratados en el contexto de sus reflexiones más maduras sobre acción, racionalidad y valor. Defiende también la posición de que muchas explicaciones de significado son lógicamente análogas a las explicaciones de la acción. Pero la evaluación de la acción en términos de las razones involucra al menos dos tipos de restricciones racionales: aquellas internas al hablante (lo que resulta racional para él) y otras externas (lo que el hablante debe hacer desde el punto de vista de los demás). Con su celebrado análisis del significado del hablante, Grice enfatiza rasgos del primer tipo; con su famosa teoría de la conversación, identifica rasgos del segundo. Y ambos tipos de restricciones solo tienen sentido si se reconoce que el significado de una palabra o de una conducta no es una cosa ni una entidad mental sino la conformidad del símbolo o la acción con un criterio normativo. La conclusión general de Grice resuena más allá de sus contribuciones precursoras en filosofía del lenguaje y permite articular una posición metafísica. En un mundo sin seres capaces de evaluar, de dar y reconocer valor, la pregunta por el significado carecería de objeto. (shrink)

Chinese philosphy of cults, Falun Gong and Indian mysticism.

On the life, philosopy, and mythological interpretations of Śukadeva as portrayed in Puranas; a study.

Comprehensive work with Hindi and Sanskrit commentaries on fundamentals of Sankhya philosophy.

La presente antología es fruto de la colaboración entre profesores de las Universidades de Paraíba (Brasil) y Jaén (España) y sólo pretende presentar un conjunto de textos extraídos de obras de autores de origen judeoconverso, o vinculados con la antigua Universidad de Baeza (siglos XVI y XVII). En estos fragmentos quedan de manifiesto planteamientos comunes sobre la observación de la naturaleza y el conocimiento, pautas y orientaciones de carácter pedagógico, criterios para la organización del cuerpo social, visión de la espiritualidad, (...) inquietudes por la formación de la mujer, o el problema de la evangelización y adoctrinamiento de los amerindios. (shrink)

Öz Çalışmanın konusu irfanî geleneğin on beşinci yüzyıldaki önemli temsilcilerinden ve aynı zamanda İbnü’l-Arabî’nin takipçilerinden biri olan İbn Türke’nin varlık mertebelerine dair görüşleridir. Konu, İbn Türke’nin varlık ve varlığın mertebeleri ile ilgili düşüncelerinden hareketle hazırlanmıştır. Birincil kaynakların esas alındığı bu çalışmada, İbn Türke ve Ekberî geleneğin önemli temsilcilerinin eserlerine müracaat edilmiştir. Çalışmanın amacı, felsefe ve kelâmın yanı sıra tasavvuf felsefesinin en önemli konularından biri olan varlık düşüncesi ve varlık mertebelerini İbn Türke’nin görüşleri çerçevesinde ele alarak âlemdeki varoluşun hakikatinin ne olduğu, (...) insanoğlunun özünün nereden geldiği gibi temel sorulara cevap olabilecek özgün bir çalışma ortaya koymaktır. Bu çalışmayla; varlığın bir ve tek hakikat olduğu, Hak’tan feyz ederek görünür âlemde ortaya çıkan her şeyin O’nun isim ve sıfatlarının tecellisi olduğu, her ne kadar Hak’tan ayrıymış gibi görünse de aslında Hakk’a doğru sonsuz bir dönüş içerisinde olduğu, dolayısıyla tek varlıktan kaynaklı çok sayıda varlığın esasen yokluğa mahkûm olduğu ve asıl varlığın Allah olduğu sonucuna varılmıştır. (shrink)

On views of five Buddhist Nyāya philosophers on Buddhist logic; includes brief biographical sketches and a list of their works.