Several metabolites serve as substrates for histone modifications and communicate changes in the metabolic environment to the epigenome. Technologies such as metabolomics and proteomics have allowed us to reconstruct the interactions between metabolic pathways and histones. These technologies have shed light on how nutrient availability can have a dramatic effect on various histone modifications. This metabolism–epigenome cross talk plays a fundamental role in development, immune function, and diseases like cancer. Yet, major challenges remain in understanding the interactions between cellular metabolism (...) and the epigenome. How the levels and fluxes of various metabolites impact epigenetic marks is still unclear. Discussed herein are recent applications and the potential of systems biology methods such as flux tracing and metabolic modeling to address these challenges and to uncover new metabolic–epigenetic interactions. These systems approaches can ultimately help elucidate how nutrients shape the epigenome of microbes and mammalian cells. (shrink)

Diagrams are a form of spatial representation that supports reasoning and problem solving. Even when diagrams are external, not to mention when there are no external representations, problem solving often calls for internal representations, that is, representations in cognition, of diagrammatic elements and internal perceptions on them. General cognitive architectures—Soar and ACT-R, to name the most prominent—do not have representations and operations to support diagrammatic reasoning. In this article, we examine some requirements for such internal representations and processes in cognitive (...) architectures. We discuss the degree to which DRS, our earlier proposal for such an internal representation for diagrams, meets these requirements. In DRS, the diagrams are not raw images, but a composition of objects that can be individuated and thus symbolized, while, unlike traditional symbols, the referent of the symbol is an object that retains its perceptual essence, namely, its spatiality. This duality provides a way to resolve what anti-imagists thought was a contradiction in mental imagery: the compositionality of mental images that seemed to be unique to symbol systems, and their support of a perceptual experience of images and some types of perception on them. We briefly review the use of DRS to augment Soar and ACT-R with a diagrammatic representation component. We identify issues for further research. (shrink)

This open access book explains how leading business organizations attempt to achieve the responsible and ethical use of artificial intelligence (AI) and other advanced information technologies. These technologies can produce tremendous insights and benefits. But they can also invade privacy, perpetuate bias, and otherwise injure people and society. To use these technologies successfully, organizations need to implement them responsibly and ethically. The question is: how to do this? Data ethics management, and this book, provide some answers. -/- The authors interviewed (...) and surveyed data ethics managers at leading companies. They asked why these experts see data ethics as important and how they seek to achieve it. This book conveys the results of that research on a concise, accessible way. -/- Much of the existing writing on data and AI ethics focuses either on macro-level ethical principles, or on micro-level product design and tooling. The interviews showed that companies need a third component: data ethics management. This third element consists of the management structures, processes, training and substantive benchmarks that companies use to operationalize their high-level ethical principles and to guide and hold accountable their developers. Data ethics management is the connective tissue makes ethical principles real. It is the focus of this book. -/- This book should be of use to organizations that wish to improve their own data ethics management efforts, legislators and policymakers who hope to build on existing management practices, scholars who study beyond compliance business behavior, and members of the public who want to understand better the threats that AI poses and how to reduce them. (shrink)

Name der Zeitschrift: Klio Jahrgang: 99 Heft: 2 Seiten: 791-796.

That diagrams are analog, i.e., homomorphic, representations of some kind, and sentential representations are not, is a generally held intuition. In this paper, we develop a formal framework in which the claim can be stated and examined, and certain puzzles resolved. We start by asking how physical things can represent information in some target domain. We lay a basis for investigating possible homomorphisms by modeling both the physical medium and the target domain as sets of variables, each with a constraint (...) structure. When a homomorphism exists, the causality of the physical medium can provide a “free ride,” automatically determining the information that is needed to solve a problem. The modeling technique enables us to show how in sentential representations the structure of the 2-D space is used non-homomorphically to define tokens, and to provide a minimal homomorphism with respect to the ordering of the arguments for n-ary functions, predicates, and operators, but otherwise there is no homomorphism with the target domain. Our treatment also characterizes diagrams as a type of a more general class of physical representations in which physical causality plays a role in providing the information needed to solve a problem. (shrink)

We describe a general problem solving mechanism that is especially suited for performing a particular form of abductive inference, or best-explanation finding. A problem solver embodying this mechanism synthesizes composite hypotheses. It does so by by combining hypothesis parts as a means to the satisfaction of explanatory goals. In this way it is able to arrive at complex, integrated conclusions which are not pre-stored.The intent is to present a computationally-feasible, task-specific problem solver for a particular information processing task which is (...) nevertheless of very great generality. The task is that of synthesizing coherent composite explanatory hypotheses based upon a prestored, and possibly vast collection of hypothesis-generating “concepts”. The authors’ claim is nothing less than to have shown, in a new sense, and surpassing all other work in this area, how it is computationally possible for an agent to come to “know”, based upon the evidence of the case. (shrink)

Red-2 is a computer program for red-cell antibody identification, a piece of "normal science". Abstracting from Red-2, a general problem solving mechanism is described that is especially suited for performing a form of abductive inference or best explanation finding. A problem solver embodying this mechanism synthesizes composite hypotheses by combining hypothesis parts. This is a common task of intelligence, and a component of scientific reasoning. The work addresses the question, 'How is science possible?' by showing how a simple but powerful (...) form of hypothesis synthesis is computationally feasible. (shrink)

Previous research has established that the success of strikes, and social movements more broadly, depends on their ability to garner support from the public. However, there is scant published research investigating the response of the public to strike action by healthcare workers. In this study, we address this gap through a study of public responses to UK nursing strikes in 2022–2023, using a data set drawn from Twitter of more than 2300 publicly available tweets. We focus on negative tweets, investigating (...) which societal discourses social media users draw on to oppose strike action by nurses. Using a combination of corpus‐based approaches and discourse analysis, we identified five categories of opposition: (i) discourse discrediting nurses; (ii) discourse discrediting strikes by nurses; (iii) discourse on the National Health System; (iv) discourse about the fairness of strikers' demands and (v) discourse about potential harmful impact. Our findings show how social media users operationalise wider societal discourses about the nursing profession (e.g., associations with care, gender, vocation and sacrifice) as well as recent crises such as the Covid‐19 pandemic to justify their opposition. The results also provide valuable insights into misconceptions about nursing, strike action and patient harm, which can inform strategies for public communication. (shrink)

To better understand the multiple individual factors that contribute to college cheating, we undertook a multivariate analysis of a national sample of 2,503 college students. Our findings indicated that demographic characteristics, character qualities, college experience, and student perceptions and attitudes are all significantly associated with academic cheating.

This paper will annoy modern logicians who follow Bertrand Russell in taking pleasure in denigrating Aristotle for [allegedly] being ignorant of relational propositions. To be sure this paper does not clear Aristotle of the charge. On the contrary, it shows that such ignorance, which seems unforgivable in the current century, still dominated the thinking of one of the greatest modern logicians as late as 1831. Today it is difficult to accept the proposition that Aristotle was blind to the fact that, (...) for example, incommensurability is a relation and not a property: that the proposition “In every square, the diagonals are incommensurable with the sides” is relational and not categorical. This paper asks the reader to do something more difficult: to accept the proposition that as late as 1831 De Morgan was blind to the same fact. This paper shows conclusively that in 1831, De Morgan was still in the grips of the allegedly Aristotelian paradigm. (shrink)

This self-contained lecture examines uses and misuses of the adverb conversely with special attention to logic and logic-related fields. Sometimes adding conversely after a conjunction such as and signals redundantly that a converse of what preceded will follow. -/- (1) Tarski read Church and, conversely, Church read Tarski. -/- In such cases, conversely serves as an extrapropositional constituent of the sentence in which it occurs: deleting conversely doesn’t change the proposition expressed. Nevertheless it does introduce new implicatures: a speaker would (...) implicate belief that the second sentence expresses a converse of what the first expresses. Perhaps because such usage is familiar, the word conversely can be used as “sentential pronoun”—or prosentence—representing a sentence expressing a converse of what the preceding sentence expresses. -/- (2) Tarski read Church and conversely. -/- This would be understood as expressing the proposition expressed by (1). Prosentential usage introduces ambiguity when the initial proposition has more than one converse. Confusion can occur if the initial proposition has non-equivalent converses. -/- Every proposition that is the negation of a false proposition is true and conversely. -/- One sense implies that every proposition that is the negation of a true proposition is false, which is true of course. But another sense, probably more likely, implies that every proposition that is true is the negation of a false proposition, which is false: the proposition that one precedes two is not a negation and thus is not the negation of a false proposition. The above also applies to synonyms of conversely such as vice versa. Although prosentence has no synonym, extrapropositional constituents are sometimes called redundant rhetoric, filler, or expletive. Authors discussed include Aristotle, Boole, De Morgan, Peirce, Frege, Russell, Tarski, and Church. END OF PUBLISHED ABSTRACT -/- See also: Corcoran, John. 2015. Converses, inner and outer. 2015. Cambridge Dictionary of Philosophy, third edition, Robert Audi (editor). Cambridge: Cambridge UP. https://www.academia.edu/10396347/Corcoran_s_27_entries_in_the_1999_second_edition_Audi_s_Cambridge_ Dictionary_of_Philosophy . (shrink)

We hypothesize that life began not with the first self‐reproducing molecule or metabolic network, but as a prebiotic ecology of co‐evolving populations of macromolecular aggregates (composomes). Each composome species had a particular molecular composition resulting from molecular complementarity among environmentally available prebiotic compounds. Natural selection acted on composomal species that varied in properties and functions such as stability, catalysis, fission, fusion and selective accumulation of molecules from solution. Fission permitted molecular replication based on composition rather than linear structure, while fusion (...) created composomal variability. Catalytic functions provided additional chemical novelty resulting eventually in autocatalytic and mutually catalytic networks within composomal species. Composomal autocatalysis and interdependence allowed the Darwinian co‐evolution of content and control (metabolism). The existence of chemical interfaces within complex composomes created linear templates upon which self‐reproducing molecules (such as RNA) could be synthesized, permitting the evolution of informational replication by molecular templating. Mathematical and experimental tests are proposed. BioEssays 28: 399–412, 2006. © 2006 Wiley Periodicals, Inc. (shrink)

This study extended the scope of previous findings in human–computer interaction research within the computers are social actors paradigm by showing that online users attribute perceptions of moral qualities to Websites and, further, that differential perceptions of morality affected the extent of persuasion. In an experiment (N = 138) that manipulated four morality conditions (universalist, relativist, egotistic, control) across worldview, a measured independent variable, users were asked to evaluate a Web site designed to aid them in making ethical decisions. Web (...) sites offered four different types of ethical advice as participants contemplated cases involving ethical quandaries. Perceptions of the Web sites’ moral qualities varied depending on the type of advice given. Further, the Web sites’ perceived morality and participants’ worldview predicted credibility, persuasiveness, and attitudes toward the Web sites. (shrink)

Logopenic variant primary progressive aphasia is a neurodegenerative language disorder primarily characterized by impaired phonological processing. Sentence repetition and comprehension deficits are observed in lvPPA and linked to impaired phonological working memory, but recent evidence also implicates impaired speech perception. Currently, neural encoding of the speech envelope, which forms the scaffolding for perception, is not clearly understood in lvPPA. We leveraged recent analytical advances in electrophysiology to examine speech envelope encoding in lvPPA. We assessed cortical tracking of the speech envelope (...) and in-task comprehension of two spoken narratives in individuals with lvPPA and age-matched controls. Despite markedly reduced narrative comprehension relative to controls, individuals with lvPPA had increased cortical tracking of the speech envelope in theta oscillations, which track low-level features, but not delta oscillations, which track speech units that unfold across a longer time scale. This neural signature was highly correlated across narratives. Results indicate an increased reliance on acoustic cues during speech encoding. This may reflect inefficient encoding of bottom-up speech cues, likely as a consequence of dysfunctional temporoparietal cortex. (shrink)

In the superannuation/pension industry, ordinary investors entrust their retirement savings to the trustees of the superannuation plan. Investors rely on the trustees to ensure that ethical business and risk management practices are implemented to protect their retirement savings. Governance practices ensure the monitoring of ethical risk management (Drennan, L. T.: 2004, Journal of Business Ethics 52, 257-266). The Australian superannuation industry presents a unique scenario. Legislation requires employers to contribute a minimum of 9% of the employees wage to retirement savings. (...) However, there are no legislated governance standards, although there are standards of recommended governance practices. In this article, we examine the level of voluntary adoption of governance practices by the trustees of Australian public sector and industry superannuation funds. We also assess whether superannuation governance practices are associated with performance and volatility /riskiness of returns. Survey results show that the majority of superannuation plans adopt recommended governance practices supporting the concept of ethical management of the member's retirement savings. The examination of governance principles that impact returns and risk shows that board size and regular review of conflicts are positively associated with return. Superannuation plans with higher volatility in returns meet more frequently. (shrink)

The sensitive period for phonetic learning, evidenced by improved native speech processing and declined non-native speech processing, represents an early milestone in language acquisition. We examined the extent that sensory encoding of speech is altered by experience during this period by testing two hypotheses: early sensory encoding of non-native speech declines as infants gain native-language experience, and music intervention reverses this decline. We longitudinally measured the frequency-following response, a robust indicator of early sensory encoding along the auditory pathway, to a (...) Mandarin lexical tone in 7- and 11-months-old monolingual English-learning infants. Infants received either no intervention or music intervention randomly between FFR recordings. The language-experience group exhibited the expected decline in FFR pitch-tracking accuracy to the Mandarin tone, while the music-intervention group did not. Our results support both hypotheses and demonstrate that both language and music experiences alter infants’ speech encoding. (shrink)

An increasing amount of data is now available from public and private sources. Furthermore, the types, formats, and number of sources of data are also increasing. Techniques for extracting, storing, processing, and analyzing such data have been developed in the last few years for managing this bewildering variety based on a structure called a knowledge graph. Industry has devoted a great deal of effort to the development of knowledge graphs, and knowledge graphs are now critical to the functions of intelligent (...) virtual assistants such as Siri, Alexa, and Google Assistant. The goal of the Ontology Summit 2020 was to understand not only what knowledge graphs are but also where they originated, why they are so popular, the current issues, and their future prospects. The summit sessions examined many examples of knowledge graphs and surveyed the relevant standards that exist and are in development for knowledge graphs. The purpose of this Communiqué is to summarize our understanding from the Summit in order to foster research and development of knowledge graphs. (shrink)

Advances in machine learning and the development of very large knowledge graphs have accompanied a proliferation of ontologies of many types and for many purposes. These ontologies are commonly developed independently, and as a result, it can be difficult to communicate about and between them. To address this difficulty of communication, ontologies and the communities they serve must agree on how their respective terminologies and formalizations relate to each other. The process of coming into accord and agreement is called “harmonization.” (...) The Ontology Summit 2021 examined the overall landscape of ontologies, the many kinds of ontology generation and harmonization, as well as the sustainability of ontologies. The Communiqué synthesizes and summarizes the findings of the summit as well as earlier summits on related issues. One of the major impediments to harmonization is the relatively poor quality of natural language definitions in many ontologies. The summit surveyed the state of the art in natural language definition development, based on lexicographic principles, as well as examples of ongoing projects that are explicitly dealing with harmonization and sustainability. (shrink)

B Chandrasekaran writes: It appears that there are three realms: the realm of matter, the realm of representations, and the realm of qualia/intentions/consciousness, not just two: matter and consciousness. I like this distinction, although I think there might more naturally be four realms to distinguish.

According to the hierarchical model of sensory information processing, sensory inputs are transmitted to cortical areas, which are crucial for complex auditory and speech processing, only after being processed in subcortical areas (Hickok and Poeppel, 2007; Rauschecker and Scott, 2009). However, studies using electroencephalography (EEG) indicate that distinguishing simultaneous auditory inputs involves a widely distributed neural network, including the medial temporal lobe, which is essential for declarative memory, and posterior association cortices (Alain et al., 2001; Squire et al., 2004). More (...) recent studies have even demonstrated plasticity of auditory signals as low as the brainstem (Suga, 2008). Collectively, studies suggest that the functional architecture of perceptual processing involves primarily top-down modulation (Suga et al., 2002; Gilbert and Li, 2013; Chandrasekaran et al., 2014). Top-down influences exerted throughout the auditory systems (Lotto and Holt, 2011) include: memory (Goldinger, 1998)1, attention (Choi et al., 2014), which has been found to modulate auditory encoding in the cochlea, a subcortical area (Maison et al., 2001), (prior) knowledge of syntax or words (Ganong, 1980; Warren, 1984)2, and experience-based expectations pertaining to the speaker's accent (Deutsch, 1996; Deutsch et al., 2004; Irino and Patterson, 2006), gender (Johnson et al., 1999), and vocal folds or tract (Irino and Patterson, 2002; Patterson and Johnsrude, 2008) . (shrink)

Semantic studies on diagrammatic notations (Barwise & Etchemendy, ; Shimojima, ; Stenning & Lemon, ) have revealed that the “non-deductive,” “emergent,” or “perceptual” effects of diagrams (Chandrasekaran, Kurup, Banerjee, Josephson, & Winkler, ; Kulpa, ; Larkin & Simon, ; Lindsay, ) are all rooted in the exploitation of spatial constraints on graphical structures. Thus, theoretically, this process is a key factor in inference with diagrams, explaining the frequently observed reduction of inferential load. The purpose of this study was to (...) examine the empirical basis for this theoretical suggestion, focusing on the reality of the constraint-exploitation strategy in actual practices of diagrammatic reasoning. Eye movements were recorded while participants used simple position diagrams to solve three- or four-term transitive inference problems. Our experiments revealed that the participants could exploit spatial constraints on graphical structures even when (a) they were not in the position of actually manipulating diagrams, (b) the semantic rule for the provided diagrams did not match their preferences, and (c) the constraint-exploitation strategy invited a partly adverse effect. These findings indicate that the hypothesized process is in fact robust, with the potential to broadly account for the inferential advantage of diagrams. (shrink)

Corcoran’s 27 entries in the 1999 second edition of Robert Audi’s Cambridge Dictionary of Philosophy [Cambridge: Cambridge UP]. -/- ancestral, axiomatic method, borderline case, categoricity, Church (Alonzo), conditional, convention T, converse (outer and inner), corresponding conditional, degenerate case, domain, De Morgan, ellipsis, laws of thought, limiting case, logical form, logical subject, material adequacy, mathematical analysis, omega, proof by recursion, recursive function theory, scheme, scope, Tarski (Alfred), tautology, universe of discourse. -/- The entire work is available online free at more than (...) one website. Paste the whole URL. http://archive.org/stream/RobertiAudi_The.Cambridge.Dictionary.of.Philosophy/Robert.Audi_The.Cambrid ge.Dictionary.of.Philosophy -/- The 2015 third edition will be available soon. Before you think of buying it read some reviews on Amazon and read reviews of its competition: For example, my review of the 2008 Oxford Companion to Philosophy, History and Philosophy of Logic,29:3,291-292. URL: http://dx.doi.org/10.1080/01445340701300429 -/- Some of the entries have already been found to be flawed. For example, Tarski’s expression ‘materially adequate’ was misinterpreted in at least one article and it was misused in another where ‘materially correct’ should have been used. The discussion provides an opportunity to bring more flaws to light. -/- Acknowledgements: Each of these entries was presented at meetings of The Buffalo Logic Dictionary Project sponsored by The Buffalo Logic Colloquium. The members of the colloquium read drafts before the meetings and were generous with corrections, objections, and suggestions. Usually one 90-minute meeting was devoted to one entry although in some cases, for example, “axiomatic method”, took more than one meeting. Moreover, about half of the entries are rewrites of similarly named entries in the 1995 first edition. Besides the help received from people in Buffalo, help from elsewhere was received by email. We gratefully acknowledge the following: José Miguel Sagüillo, John Zeis, Stewart Shapiro, Davis Plache, Joseph Ernst, Richard Hull, Concha Martinez, Laura Arcila, James Gasser, Barry Smith, Randall Dipert, Stanley Ziewacz, Gerald Rising, Leonard Jacuzzo, George Boger, William Demopolous, David Hitchcock, John Dawson, Daniel Halpern, William Lawvere, John Kearns, Ky Herreid, Nicolas Goodman, William Parry, Charles Lambros, Harvey Friedman, George Weaver, Hughes Leblanc, James Munz, Herbert Bohnert, Robert Tragesser, David Levin, Sriram Nambiar, and others. -/- . (shrink)

2006. George Boole. Encyclopedia of Philosophy. 2nd edition. Detroit: Macmillan Reference USA. -/- George Boole (1815-1864), whose name lives among modern computer-related sciences in Boolean Algebra, Boolean Logic, Boolean Operations, and the like, is one of the most celebrated logicians of all time. Ironically, his actual writings often go unread and his actual contributions to logic are virtually unknown—despite the fact that he was one of the clearest writers in the field. Working with various students including Susan Wood and (...) class='Hi'>Sriram Nambiar, I have written several publications trying to set the record straight—but so far to little avail. This encyclopedia entry is one more attempt to set the record straight in a way that can be appreciated by non-experts.Also see https://www.academia.edu/10161999/Booles_criteria_of_validity_and_invalidity . (shrink)