Results for 'causal specificity'

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  1. Measuring Causal Specificity.Paul E. Griffiths, Arnaud Pocheville, Brett Calcott, Karola Stotz, Hyunju Kim & Rob Knight - 2015 - Philosophy of Science 82 (4):529-555.
    Several authors have argued that causes differ in the degree to which they are ‘specific’ to their effects. Woodward has used this idea to enrich his influential interventionist theory of causal explanation. Here we propose a way to measure causal specificity using tools from information theory. We show that the specificity of a causal variable is not well-defined without a probability distribution over the states of that variable. We demonstrate the tractability and interest of our (...)
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  2.  55
    Causal specificity and the instructive–permissive distinction.Brett Calcott - 2017 - Biology and Philosophy 32 (4):481-505.
    I use some recent formal work on measuring causation to explore a suggestion by James Woodward: that the notion of causal specificity can clarify the distinction in biology between permissive and instructive causes. This distinction arises when a complex developmental process, such as the formation of an entire body part, can be triggered by a simple switch, such as the presence of particular protein. In such cases, the protein is said to merely induce or "permit" the developmental process, (...)
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  3.  13
    When Causal Specificity Does Not Matter (Much): Insights from HIV Treatment.Jacob P. Neal - 2019 - Philosophy of Science 86 (5):836-846.
    Philosophers of biology generally agree that causal specificity tracks biological importance: more specific causes are more important. I argue that this correlation does not hold in much research aimed at biomedical intervention. Applying James Woodward’s analysis of causal specificity to the development and design of HIV treatments, I show that drugs that are less causally specific produce better therapeutic outcomes and are more highly valued. Thus, I conclude that the importance of biological causes does not track (...)
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  4. Causal Specificity, Biological Possibility and Non-parity about Genetic Causes.Marcel Weber - manuscript
    Several authors have used the notion of causal specificity in order to defend non-parity about genetic causes (Waters 2007, Woodward 2010, Weber 2017, forthcoming). Non-parity in this context is the idea that DNA and some other biomolecules that are often described as information-bearers by biologists play a unique role in life processes, an idea that has been challenged by Developmental Systems Theory (e.g., Oyama 2000). Indeed, it has proven to be quite difficult to state clearly what the alleged (...)
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  5. Which Kind of Causal Specificity Matters Biologically?Marcel Weber - 2017 - Philosophy of Science 84 (3):574-585.
    Griffiths et al. (2015) have proposed a quantitative measure of causal specificity and used it to assess various attempts to single out genetic causes as being causally more specific than other cellular mechanisms, for example, alternative splicing. Focusing in particular on developmental processes, they have identified a number of important challenges for this project. In this discussion note, I would like to show how these challenges can be met.
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  6.  15
    Measuring Causal Specificity.Arnaud Pocheville Paul E. Griffiths - 2015 - Philosophy of Science 82 (4):529-555.
  7.  14
    What is Causal Specificity About, and What is it Good for in Philosophy of Biology?María Ferreira Ruiz - 2021 - Acta Biotheoretica 69 (4):821-839.
    The concept of causal specificity is drawing considerable attention from philosophers of biology. It became the rationale for rejecting (and occasionally, accepting) a thesis of causal parity of developmental factors. This literature assumes that attributing specificity to causal relations is at least in principle a straightforward (if not systematic) task. However, the parity debate in philosophy of biology seems to be stuck at a point where it is not the biological details that will help move (...)
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  8.  28
    Variation of information as a measure of one-to-one causal specificity.Pierrick Bourrat - 2018 - European Journal for Philosophy of Science 9 (1):11.
    The interventionist account provides us with several notions permitting the qualification of causal relationships. In recent years, there has been a push toward formalizing these notions using information theory. In this paper, I discuss one of them, namely causal specificity. The notion of causal specificity is ambiguous as it can refer to at least two different concepts. After having presented these, I show that current attempts to formalize causal specificity in information theoretic terms (...)
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  9.  18
    Variation of information as a measure of one-to-one causal specificity.Pierrick Bourrat - 2018 - European Journal for Philosophy of Science 9 (1):1-18.
    The interventionist account provides us with several notions permitting the qualification of causal relationships. In recent years, there has been a push toward formalizing these notions using information theory. In this paper, I discuss one of them, namely causal specificity. The notion of causal specificity is ambiguous as it can refer to at least two different concepts. After having presented these, I show that current attempts to formalize causal specificity in information theoretic terms (...)
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  10. The Central Dogma as a Thesis of Causal Specificity.Marcel Weber - 2006 - History and Philosophy of the Life Sciences 28 (4):595-610.
    I present a reconstruction of F.H.C. Crick's two 1957 hypotheses "Sequence Hypothesis" and "Central Dogma" in terms of a contemporary philosophical theory of causation. Analyzing in particular the experimental evidence that Crick cited, I argue that these hypotheses can be understood as claims about the actual difference-making cause in protein synthesis. As these hypotheses are only true if restricted to certain nucleic acids in certain organisms, I then examine the concept of causal specificity and its potential to counter (...)
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  11.  25
    Gene-concept pluralism, causal specificity, and information.Ronald J. Planer - 2015 - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 53:129-133.
  12.  16
    Discussion Note: Which Kind of Causal Specificity Matters Biologically?Marcel Weber - unknown
    Griffiths et al. have proposed a quantitative measure of causal specificity and used it to assess various attempts to single out genetic causes as being causally more specific than other cellular mechanisms, for example, alternative splicing. Focusing in particular on developmental processes, they have identified a number of important challenges for this project. In this discussion note, I would like to show how these challenges can be met.
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  13.  15
    Causing something to be one way rather than another: Genetic Information, causal specificity and the relevance of linear order.Barbara Osimani - unknown
    Purpose The purpose of this paper is to suggest a definition of genetic information by taking into account the debate surrounding it. Particularly, the objections raised by Developmental Systems Theory to Teleosemantic endorsements of the notion of genetic information as well as deflationist approaches which suggest to ascribe the notion of genetic information a heuristic value at most, and to reduce it to that of causality. Design/methodology/approach The paper presents the notion of genetic information through its historical evolution and analyses (...)
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  14. Gene-concept pluralism, causal specificity, and information. [REVIEW]Ronald J. Planer - forthcoming - Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences.
  15.  23
    Explanation by intentional, functional, and causal specification.Theo A. F. Kuipers - 1996 - Poznan Studies in the Philosophy of the Sciences and the Humanities 47:209-236.
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  16. Binding Specificity and Causal Selection in Drug Design.Oliver M. Lean - 2020 - Philosophy of Science 87 (1):70-90.
    Binding specificity is a centrally important concept in molecular biology, yet it has received little philosophical attention. Here I aim to remedy this by analyzing binding specificity as a causal property. I focus on the concept’s role in drug design, where it is highly prized and hence directly studied. From a causal perspective, understanding why binding specificity is a valuable property of drugs contributes to an understanding of causal selection—of how and why scientists distinguish (...)
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  17. Biological Information, Causality and Specificity - an Intimate Relationship.Karola Stotz & Paul E. Griffiths - 2017 - In Sara Imari Walker, Paul Davies & George Ellis (eds.), From Matter to Life: Information and Causality. Cambridge and New York: Cambridge University Press. pp. 366-390.
    In this chapter we examine the relationship between biological information, the key biological concept of specificity, and recent philosophical work on causation. We begin by showing how talk of information in the molecular biosciences grew out of efforts to understand the sources of biological specificity. We then introduce the idea of ‘causal specificity’ from recent work on causation in philosophy, and our own, information theoretic measure of causal specificity. Biological specificity, we argue, is (...)
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  18.  23
    Causal Concepts Guiding Model Specification in Systems Biology.Dana Matthiessen - 2017 - Disputatio 9 (47):499-527.
    In this paper I analyze the process by which modelers in systems biology arrive at an adequate representation of the biological structures thought to underlie data gathered from high-throughput experiments. Contrary to views that causal claims and explanations are rare in systems biology, I argue that in many studies of gene regulatory networks modelers aim at a representation of causal structure. In addressing modeling challenges, they draw on assumptions informed by theory and pragmatic considerations in a manner that (...)
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  19.  20
    Domain-specific perceptual causality in children depends on the spatio-temporal configuration, not motion onset.Anne Schlottmann, Katy Cole, Rhianna Watts & Marina White - 2013 - Frontiers in Psychology 4.
  20.  5
    The Causal Exclusion Argument and its Critique in Debates on Reductionism: The Case of One Specific Clash.Oleksandr Holubenko - 2024 - Philosophy and Cosmology 32.
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  21. Domain-Specific Perceptual Causality in Children Depends on the SpatioTemporal Configuration, Not Motion Onset.Anne Schlottmann, Katy Cole, Rhianna Watts & Marina White - 2014 - In Marc J. Buehner (ed.), Time and causality. [Lausanne, Switzerland]: Frontiers Media SA.
  22.  11
    Non Causal Theories and Using Auxiliary Assumptions to Handle Situation‐Specificity.David Trafimow - 2016 - Journal for the Theory of Social Behaviour 46 (4).
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  23.  20
    Non Causal Theories and Using Auxiliary Assumptions to Handle Situation‐Specificity.David Trafimow - 2017 - Journal for the Theory of Social Behaviour 47 (2):154-158.
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  24.  19
    Problems with using stability, specificity, and proportionality as criteria for evaluating strength of scientific causal explanations: commentary on Lynch et al. (2019).Gry Oftedal - 2020 - Biology and Philosophy 35 (1):26.
    Lynch et al. (Biol Philos 34:62, 2019) employ stability, specificity, and proportionality as criteria for evaluating microbiome causal explanations. Although these causal characteristics signify relevant differences between causal roles, I suggest that they should not be used as general criteria for strong or good causal explanations.
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  25.  37
    A dual-process specification of causal conditional reasoning.Niki Verschueren, Walter Schaeken & Géry D'Ydewalle - 2005 - Thinking and Reasoning 11 (3):239-278.
  26. Causal Selection versus Causal Parity in Biology: Relevant Counterfactuals and Biologically Normal Interventions.Marcel Weber - forthcoming - In Brian J. Hanley & C. Kenneth Waters (eds.), Philosophical Perspectives on Causal Reasoning in Biology. Minnesota Studies in Philosophy of Science. Vol. XXI. Minneapolis: University of Minnesota Press.
    Causal selection is the task of picking out, from a field of known causally relevant factors, some factors as elements of an explanation. The Causal Parity Thesis in the philosophy of biology challenges the usual ways of making such selections among different causes operating in a developing organism. The main target of this thesis is usually gene centrism, the doctrine that genes play some special role in ontogeny, which is often described in terms of information-bearing or programming. This (...)
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  27.  11
    Causal Search, Causal Modeling, and the Folk.David Danks - 2016 - In Justin Sytsma & Wesley Buckwalter (eds.), A Companion to Experimental Philosophy. Malden, MA: Wiley. pp. 463–471.
    Causal models provide a framework for precisely representing complex causal structures, where specific models can be used to efficiently predict, infer, and explain the world. At the same time, we often do not know the full causal structure a priori and so must learn it from data using a causal model search algorithm. This chapter provides a general overview of causal models and their uses, with a particular focus on causal graphical models (the most (...)
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  28.  65
    Causal Models and Metaphysics - Part 1: Using Causal Models.Jennifer McDonald - forthcoming - Philosophy Compass.
    This paper provides a general introduction to the use of causal models in the metaphysics of causation, specifically structural equation models and directed acyclic graphs. It reviews the formal framework, lays out a method of interpretation capable of representing different underlying metaphysical relations, and describes the use of these models in analyzing causation.
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  29.  20
    Semiotics and Causal Analysis: Objective Specificative Causality in the Middle of Mcluhan’s Tetrad.Christopher S. Morrissey - 2013 - Semiotics:293-302.
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  30. Coherent Causal Control: A New Distinction within Causation.Marcel Weber - 2022 - European Journal for Philosophy of Science 12 (4):69.
    The recent literature on causality has seen the introduction of several distinctions within causality, which are thought to be important for understanding the widespread scientific practice of focusing causal explanations on a subset of the factors that are causally relevant for a phenomenon. Concepts used to draw such distinctions include, among others, stability, specificity, proportionality, or actual-difference making. In this contribution, I propose a new distinction that picks out an explanatorily salient class of causes in biological systems. Some (...)
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  31. Specificity of association in epidemiology.Thomas Blanchard - 2022 - Synthese 200 (6).
    The epidemiologist Bradford Hill famously argued that in epidemiology, specificity of association (roughly, the fact that an environmental or behavioral risk factor is associated with just one or at most a few medical outcomes) is strong evidence of causation. Prominent epidemiologists have dismissed Hill’s claim on the ground that it relies on a dubious `one-cause one effect’ model of disease causation. The paper examines this methodological controversy, and argues that specificity considerations do have a useful role to play (...)
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  32. Causal Order and Kinds of Robustness.Arnon Levy - 2017 - In Snait Gissis, Ehud Lamm & Ayelet Shavit (eds.), Landscapes of Collectivity in the Life Sciences. Cambridge, Massachusetts: MIT Press. pp. 269-280.
    This paper derives from a broader project dealing with the notion of causal order. I use this term to signify two kinds of parts-whole dependence: Orderly systems have rich, decomposable, internal structure; specifically, parts play differential roles, and interactions are primarily local. Disorderly systems, in contrast, have a homogeneous internal structure, such that differences among parts and organizational features are less important. Orderliness, I suggest, marks one key difference between individuals and collectives. My focus here will be the connection (...)
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  33. Causal exclusion without physical completeness and no overdetermination.Alexander Gebharter - 2017 - Abstracta 10:3-14.
    Hitchcock demonstrated that the validity of causal exclusion arguments as well as the plausibility of several of their premises hinges on the specific theory of causation endorsed. In this paper I show that the validity of causal exclusion arguments—if represented within the theory of causal Bayes nets the way Gebharter suggests—actually requires much weaker premises than the ones which are typically assumed. In particular, neither completeness of the physical domain nor the no overdetermination assumption are required.
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  34. How causal are microbiomes? A comparison with the H elicobacter pylori explanation of ulcers.Kate E. Lynch, Emily C. Parke & Maureen A. O’Malley - 2019 - Biology and Philosophy 34 (6):62.
    Human microbiome research makes causal connections between entire microbial communities and a wide array of traits that range from physiological diseases to psychological states. To evaluate these causal claims, we first examine a well-known single-microbe causal explanation: of Helicobacter pylori causing ulcers. This apparently straightforward causal explanation is not so simple, however. It does not achieve a key explanatory standard in microbiology, of Koch’s postulates, which rely on manipulations of single-microorganism cultures to infer causal relationships (...)
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  35.  32
    The Causal Power of Social Structures: Emergence, Structure and Agency.Dave Elder-Vass - 2010 - Cambridge University Press.
    The problem of structure and agency has been the subject of intense debate in the social sciences for over 100 years. This book offers a solution. Using a critical realist version of the theory of emergence, Dave Elder-Vass argues that, instead of ascribing causal significance to an abstract notion of social structure or a monolithic concept of society, we must recognise that it is specific groups of people that have social structural power. Some of these groups are entities with (...)
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  36.  76
    The tetrad project: Constraint based aids to causal model specification.Richard Scheines - 1998 - Multivariate Behavioral Research 33 (1):65-117.
    The statistical community has brought logical rigor and mathematical precision to the problem of using data to make inferences about a model’s parameter values. The TETRAD project, and related work in computer science and statistics, aims to apply those standards to the problem of using data and background knowledge to make inferences about a model’s specification. We begin by drawing the analogy between parameter estimation and model specification search. We then describe how the specification of a structural equation model entails (...)
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  37.  55
    Causal Networks or Causal Islands? The Representation of Mechanisms and the Transitivity of Causal Judgment.Samuel G. B. Johnson & Woo-Kyoung Ahn - 2015 - Cognitive Science 39 (7):1468-1503.
    Knowledge of mechanisms is critical for causal reasoning. We contrasted two possible organizations of causal knowledge—an interconnected causal network, where events are causally connected without any boundaries delineating discrete mechanisms; or a set of disparate mechanisms—causal islands—such that events in different mechanisms are not thought to be related even when they belong to the same causal chain. To distinguish these possibilities, we tested whether people make transitive judgments about causal chains by inferring, given A (...)
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  38.  87
    Information causality, the Tsirelson bound, and the ‘being-thus’ of things.Michael E. Cuffaro - 2020 - Studies in History and Philosophy of Science Part B: Studies in History and Philosophy of Modern Physics 72:266-277.
    The principle of 'information causality' can be used to derive an upper bound---known as the 'Tsirelson bound'---on the strength of quantum mechanical correlations, and has been conjectured to be a foundational principle of nature. In this paper, however, I argue that the principle has not to date been sufficiently motivated to play this role; the motivations that have so far been given are either unsatisfactorily vague or else amount to little more than an appeal to intuition. I then consider how (...)
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  39. Causal Projectivism, Agency, and Objectivity.Elena Popa - 2016 - International Studies in the Philosophy of Science 30 (2):147-163.
    This article examines how specific realist and projectivist versions of manipulability theories of causation deal with the problem of objectivity. Does an agent-dependent concept of manipulability imply that conflicting causal claims made by agents with different capacities can come out as true? In defence of the projectivist stance taken by the agency view, I argue that if the agent’s perspective is shown to be uniform across different agents, then the truth-values of causal claims do not vary arbitrarily and, (...)
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  40.  86
    Causal Warrant for Realism about Particle Physics.Matthias Egg - 2012 - Journal for General Philosophy of Science / Zeitschrift für Allgemeine Wissenschaftstheorie 43 (2):259-280.
    While scientific realism generally assumes that successful scientific explanations yield information about reality, realists also have to admit that not all information acquired in this way is equally well warranted. Some versions of scientific realism do this by saying that explanatory posits with which we have established some kind of causal contact are better warranted than those that merely appear in theoretical hypotheses. I first explicate this distinction by considering some general criteria that permit us to distinguish causal (...)
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  41.  49
    How causal are microbiomes? A comparison with the Helicobacter pylori explanation of ulcers.Kate E. Lynch, Emily C. Parke & Maureen A. O’Malley - 2019 - Biology and Philosophy 34 (6):62.
    Human microbiome research makes causal connections between entire microbial communities and a wide array of traits that range from physiological diseases to psychological states. To evaluate these causal claims, we first examine a well-known single-microbe causal explanation: of Helicobacter pylori causing ulcers. This apparently straightforward causal explanation is not so simple, however. It does not achieve a key explanatory standard in microbiology, of Koch’s postulates, which rely on manipulations of single-microorganism cultures to infer causal relationships (...)
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  42.  40
    How causal are microbiomes? A comparison with the Helicobacter pylori explanation of ulcers.Kate E. Lynch, Emily C. Parke & Maureen A. O’Malley - 2019 - Biology and Philosophy 34 (6):62.
    Human microbiome research makes causal connections between entire microbial communities and a wide array of traits that range from physiological diseases to psychological states. To evaluate these causal claims, we first examine a well-known single-microbe causal explanation: of Helicobacter pylori causing ulcers. This apparently straightforward causal explanation is not so simple, however. It does not achieve a key explanatory standard in microbiology, of Koch’s postulates, which rely on manipulations of single-microorganism cultures to infer causal relationships (...)
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  43.  48
    Why Moritz Schlick’s View on Causality Is Rooted in a Specific Understanding of Quantum Mechanics.Richard Dawid - 2021 - In Sebastian Lutz & Adam Tuboly (eds.), Logical Empiricism and the PhysicalSciences. Routledge. pp. 283-294.
    Moritz Schlick’s interpretation of the causality principle is based on Schlick’s understanding of quantum mechanics and on his conviction that quantum mechanics strongly supports an empiricist reading of causation in his sense. The present paper compares the empiricist position held by Schlick with Bas van Fraassen’s more recent conception of constructive empiricism. It is pointed out that the development from Schlick’s understanding of logical empiricism to constructive empiricism reflects a difference between the understanding of quantum mechanics endorsed by Schlick and (...)
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  44.  21
    Philosophy of Cognitive Neuroscience: Causal Explanations, Mechanisms and Experimental Manipulations.Lena Kästner - 2017 - Boston: De Gruyter.
    How do cognitive neuroscientists explain phenomena like memory or language processing? This book examines the different kinds of experiments and manipulative research strategies involved in understanding and eventually explaining such phenomena. Against this background, it evaluates contemporary accounts of scientific explanation, specifically the mechanistic and interventionist accounts, and finds them to be crucially incomplete. Besides, mechanisms and interventions cannot actually be combined in the way usually done in the literature. This book offers solutions to both these problems based on insights (...)
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  45.  13
    Causality and Modern Science.Mario Bunge - 1979 - New York: Routledge.
    The causal problem has become topical once again. While we are no longer causalists or believers in the universal truth of the causal principle we continue to think of causes and effects, as well as of causal and noncausal relations among them. Instead of becoming indeterminists we have enlarged determinism to include noncausal categories. And we are still in the process of characterizing our basic concepts and principles concerning causes and effects with the help of exact tools. (...)
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  46. The Return of Causal Powers?Andreas Hüttemann - 2021 - In Stathis Psillos, Benjamin Hill & Henrik Lagerlund (eds.), Causal Powers in Science: Blending Historical and Conceptual Perspectives. Oxford University Press. pp. 168-185.
    Powers, capacities and dispositions (in what follows I will use these terms synonymously) have become prominent in recent debates in metaphysics, philosophy of science and other areas of philosophy. In this paper I will analyse in some detail a well-known argument from scientific practice to the existence of powers/capacities/dispositions. According to this argument the practice of extrapolating scientific knowledge from one kind of situation to a different kind of situation requires a specific interpretation of laws of nature, namely as attributing (...)
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  47. Causal Compatibilism and the Exclusion Problem.Terry Horgan - 2001 - Theoria: Revista de Teoría, Historia y Fundamentos de la Ciencia 16 (1):95-115.
    Causal compatibilism claims that even though physics is causally closed, and even though mental properties are multiply realizable and are not identical to physical causal properties, mental properties are causal properties nonetheless. This position asserts that there is genuine causation at multiple descriptive/ontological levels; physics-level causal claims are not really incompatible with mentalistic causal claims. I articulate and defend a version of causal compatibilism that incorporates three key contentions. First, causation crucially involves robust patterns (...)
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  48. Causally productive activities.Jim Bogen - 2008 - Studies in History and Philosophy of Science Part A 39 (1):112-123.
    This paper suggests and discusses an answer to the following question: What distinguishes causal from non-causal or coincidental co-occurrences? The answer derives from Elizabeth Anscombe’s idea that causality is a highly abstract concept whose meaning derives from our understanding of specific causally productive activities, and from her rejection of the assumption that causality can be informatively understood in terms of actual or counterfactual regularities.Keywords: Elizabeth Anscombe; Causality; Explanation; Inhibition.
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  49.  59
    Are Causal Laws Purely General?Peter Alexander & Peter Downing - 1970 - Aristotelian Society Supplementary Volume 44 (1):15-50.
    Peter Alexander: It is presumably admitted that laws, whether causal or not, are universal in form; they are appropriately stated in universal categoricals or unrestricted hypotheticals. I assume that this is not at issue in the question set. I take our question to be this: given that causal laws are universal statements, can they be said to be about, to apply to, to hold for, individual things? -/- Peter Downing: Mr. Alexander maintains that there are 'irreducibly singular' (...) statements, and that from this it follows that causal laws need not be purely general. The view that there are irreducibly singular causal statements appears to commit Alexander to rejecting two theses: (i) that singular causal statements are analysable into statements containing specific generalizations, [...] (ii) That singular causal statements are analysable into statements containing incompletely specified generalizations [...]. Thesis (i) is, I think, clearly false. [...] Thesis (ii), however, is not easily refuted. (shrink)
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  50.  65
    Causal mechanisms of evolution and the capacity for niche construction.Ward B. Watt - 2013 - Biology and Philosophy 28 (5):757-766.
    Ernst Mayr proposed a distinction between “proximate”, mechanistic, and “ultimate”, evolutionary, causes of biological phenomena. This dichotomy has influenced the thinking of many biologists, but it is increasingly perceived as impeding modern studies of evolutionary processes, including study of “niche construction” in which organisms alter their environments in ways supportive of their evolutionary success. Some still find value for this dichotomy in its separation of answers to “how?” versus “why?”questions about evolution. But “why is A?” questions about evolution necessarily take (...)
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