Linked bibliography for the SEP article "Developmental Biology" by Alan Love

This is an automatically generated and experimental page

If everything goes well, this page should display the bibliography of the aforementioned article as it appears in the Stanford Encyclopedia of Philosophy, but with links added to PhilPapers records and Google Scholar for your convenience. Some bibliographies are not going to be represented correctly or fully up to date. In general, bibliographies of recent works are going to be much better linked than bibliographies of primary literature and older works. Entries with PhilPapers records have links on their titles. A green link indicates that the item is available online at least partially.

This experiment has been authorized by the editors of the Stanford Encyclopedia of Philosophy. The original article and bibliography can be found here.

References

  • Abouheif, E., 1997, “Developmental genetics and homology: a hierarchical approach”, Trends in Ecology and Evolution, 12: 405–408. (Scholar)
  • Abouheif, E., M. Akam, W.J. Dickinson, P.W.H. Holland, A. Meyer, N.H. Patel, R.A. Raff, V.L. Roth, and G.A. Wray, 1997, “Homology and developmental genes”, Trends in Genetics, 13: 432–433. (Scholar)
  • Ankeny, R.A., 2009, “Model organisms as fictions”, in Fictions in Science: Philosophical Essays on Modeling and Idealization, M. Suárez (ed.), 193–204. New York and London: Routledge, Tayor & Francis Group. (Scholar)
  • –––, 2012, “Detecting themes and variations: the use of cases in developmental biology”, Philosophy of Science, 79: 644–654. (Scholar)
  • Ankeny, R.A., and S. Leonelli, 2011, “What’s so special about model organisms?”, Studies in History and Philosophy of Science, 42: 313–323. (Scholar)
  • Asp, M., S. Giacomello, L. Larsson, C. Wu, D. Fürth, X. Qian, E. Wärdell, J. Custodio, J. Reimegård, F. Salmén, C. Österholm, P. L. Ståhl, E. Sundström, E. Åkesson, O. Bergmann, M. Bienko, A. Månsson-Broberg, M. Nilsson, C. Sylvén and J. Lundeberg, 2019, “A spatiotemporal organ-wide gene expression and cell atlas of the developing human heart”, Cell, 179: 1647–1660.
  • Austin, C.J., 2019, Essence in the Age of Evolution: A New Theory of Natural Kinds, New York: Routledge. (Scholar)
  • Bechtel, W, and R. Richardson, 1993, Discovering Complexity: Decomposition and Localization as Strategies in Scientific Research, Princeton: Princeton University Press. (Scholar)
  • Berrill, N.J., 1961, Growth, Development, and Pattern, San Francisco: W.H. Freeman and Company. (Scholar)
  • Bier, E., and W. McGinnis, 2003, “Model organisms in the study of development and disease”, in Molecular Basis of Inborn Errors of Development, C.J. Epstein, R.P. Erickson, and A. Wynshaw-Boris (eds.), 25–45. New York: Oxford University Press. (Scholar)
  • Bolker, J.A., 1995, “Model systems in developmental biology”, BioEssays, 17: 451–455. (Scholar)
  • –––, 2009, “Exemplary and surrogate models: Two modes of representation in biology”, Perspectives in Biology and Medicine, 52: 485–499. (Scholar)
  • Brand, T., 2003, “Heart development: molecular insights into cardiac specification”, Developmental Biology, 258: 1–19. (Scholar)
  • Brigandt, I., 2013, “Systems biology and the integration of mechanistic explanation and mathematical explanation”, Studies in History and Philosophy of Biological and Biomedical Sciences, 44: 477–492. (Scholar)
  • Brigandt, I., and A.C. Love, 2012, “Conceptualizing evolutionary novelty: Moving beyond definitional debates”, Journal of Experimental Zoology (Mol Dev Evol), 318B: 417–427. (Scholar)
  • Brouzés, E., and E. Farge, 2004, “Interplay of mechanical deformation and patterned gene expression in developing embryos”, Current Opinion in Genetics & Development, 14: 367–374. (Scholar)
  • Colbert, M.W., and T. Rowe, 2008, “Ontogenetic Sequence Analysis: using parsimony to characterize developmental sequences and sequence polymorphism”, Journal of Experimental Zoology (Mol Dev Evol), 310B: 398–416. (Scholar)
  • Craver, C.F., 2007, Explaining the Brain: Mechanisms and the Mosaic Unity of Neuroscience, New York: Oxford University Press. (Scholar)
  • Crotty, D.A., and A. Gann, 2009, Emerging Model Organisms: A Laboratory Manual, Volume 1, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press. (Scholar)
  • Damen, W.G.M., 2007, “Evolutionary conservation and divergence of the segmentation process in arthropods”, Developmental Dynamics, 236: 1379–1391. (Scholar)
  • Darden, L., 2006, Reasoning in Biological Discoveries: Essays on Mechanisms, Interfield Relations, and Anomaly Resolution, New York: Cambridge University Press. (Scholar)
  • Davidson, E.H., 2006, The Regulatory Genome: Gene Regulatory Networks in Development and Evolution, San Diego: Academic Press. (Scholar)
  • Davidson, E.H. and I.S. Peter, 2015, Genomic Control Process: Development and Evolution, San Diego, CA: Academic Press. (Scholar)
  • Davies, J.A., 2013, Mechanisms of Morphogenesis: The Creation of Biological Form, 2nd edition, San Diego, CA: Elsevier Academic Press. (Scholar)
  • Davis, R.H., 2004, “The age of model organisms”, Nature Reviews Genetics, 5: 69–76. (Scholar)
  • DeWitt, T.J., and S.M. Scheiner, 2004, Phenotypic Plasticity: Functional and Conceptual Approaches, New York: Oxford University Press. (Scholar)
  • DiTeresi, C.A., 2010, “Taming Variation: Typological Thinking and Scientific Practice in Developmental Biology”, University of Chicago, Chicago. PhD Thesis. (Scholar)
  • Dubuis, J.O., G. Tkačik, E.F. Wieschaus, T. Gregor and W. Bialek, 2013, “Positional information, in bits”, Proceedings of the National Academy of Sciences, 110: 16301–16308. (Scholar)
  • Dupré, J., 2001, “In defence of classification”, Studies the History and Philosophy of Biological and Biomedical Sciences, 32: 203–219. (Scholar)
  • Ellis, R.J., 2001, “Macromolecular crowding: obvious but underappreciated”, Trends in Biochemical Sciences, 26: 597–604. (Scholar)
  • Emlen, D.J., 2000, “Integrating development with evolution: A case study with beetle horns”, BioScience, 50: 403–418. (Scholar)
  • Facchin, S., R. Lopreiato, M. Ruzzene, O. Marin, G. Sartori, C. Götz, M. Montenarh, G. Carignani, and L.A. Pinna, 2003, “Functional homology between yeast piD261/Bud32 and human PRPK: both phosphorylate p53 and PRPK partially complements piD261/Bud32 deficiency”, FEBS Letters, 549: 63–66. (Scholar)
  • Fagan, M.B., 2013, Philosophy of Stem Cell Biology: Knowledge in Flesh and Blood, London: Palgrave Macmillan. (Scholar)
  • –––, 2016, “Generative models: human embryonic stem cells and multiple modeling relations”, Studies in History and Philosophy of Science, 56: 122–134. (Scholar)
  • Forgacs, G., and S.A. Newman, 2005, Biological Physics of the Developing Embryo, New York: Cambridge University Press. (Scholar)
  • Frankino, W.A., and R.A. Raff, 2004, “Evolutionary importance and pattern of phenotypic plasticity”, in DeWitt and Scheiner 2004: 64–81. (Scholar)
  • Fraser, S.E., and R.M. Harland, 2000, “The molecular metamorphosis of experimental embryology”, Cell, 100: 41–55. (Scholar)
  • Furley, D., and J.S. Wilkie, 1984, Galen: On Respiration and the Arteries, Princeton: Princeton University Press. (Scholar)
  • Gajewski, K., and R.A. Schulz, 2002, “Comparative genetics of heart development: conserved cardiogenic factors in Drosophila and vertebrates”, in Cardiac Development, B. Ostadal, M. Nagano, and N.S. Dhalla (eds.), 1–23. Boston: Kluwer Academic Publishers. (Scholar)
  • Garson, J., 2016, A Critical Overview of Biological Functions, Dordrecht: Springer. (Scholar)
  • Gerhart, J., and M. Kirschner, 2007, “The theory of facilitated variation”, Proceedings of the National Academy of Sciences USA, 104: 8582–8589. (Scholar)
  • Ghiselin, M.T., 2005, “Homology as a relation of correspondence between parts of individuals”, Theory in Biosciences, 124: 91–103. (Scholar)
  • Giere, R.N., 1999, Science Without Laws, Chicago: University of Chicago Press. (Scholar)
  • Gilbert, S.F. (ed.), 1991, A Conceptual History of Modern Embryology (Volume 7: Developmental Biology: A Comprehensive Synthesis), New York: Plenum Press. (Scholar)
  • –––, 2000 [2003, 2006, 2010], Developmental Biology, 6th edition, Sunderland, MA: Sinauer Associates, Inc., 2000; 7th edition, 2003; 8th edition, 2006; 9th edition, 2010. (Scholar)
  • Gilbert, S.F. and D. Epel, 2009, Ecological Developmental Biology: Integrating Epigenetics, Medicine, and Evolution, Sunderland, MA: Sinauer. (Scholar)
  • Glennan, S. and P. Illari (eds.), 2017, The Routledge Handbook of the Philosophy of Mechanisms and Mechanical Philosophy, New York: Routledge. (Scholar)
  • Green, S. and R. Batterman, 2017, “Biology meets physics: reductionism and multi-scale modeling of morphogenesis”, Studies in History and Philosophy of Biological and Biomedical Sciences, 61: 20–34. (Scholar)
  • Greene, E., 1989, “A diet-induced developmental polymorphism in a caterpillar”, Science, 243: 643–646.
  • Griesemer, J.R., 1996, “Periodization and models in historical biology”, in New Perspectives on the History of Life, M.T. Ghiselin, and G. Pinna (eds.), 19–30. San Francisco: California Academy of Sciences. (Scholar)
  • Griffiths, P. and K. Stotz, 2013, Genetics and Philosophy: An Introduction, New York: Cambridge University Press. (Scholar)
  • Gu, Z., L. David, D. Petrov, T. Jones, R.W. Davis, and L.M. Steinmetz, 2005, “Elevated evolutionary rates in the laboratory strain of Saccharomyces cerevisiae”, Proceedings of the National Academy of Sciences USA, 102: 1092–1097. (Scholar)
  • Gulledge, A.T., and Y. Kawaguchi, 2007, “Phasic cholinergic signaling in the hippocampus: functional homology with the neocortex?” Hippocampus, 17: 327–332. (Scholar)
  • Hall, B.K. (ed.), 1994, Homology: The Hierarchical Basis of Comparative Biology, San Diego: Academic Press. (Scholar)
  • Hall, L.R., 2005, “Exploratory experiments”, Philosophy of Science, 72: 888–899. (Scholar)
  • Hamburger, V., 1988, The Heritage of Experimental Embryology: Hans Spemann and the Organizer, New York: Oxford University Press. (Scholar)
  • Hamburger, V., and H.L. Hamilton, 1951, “A series of normal stages in the development of the chick embryo”, Journal of Morphology, 88: 49–92.
  • Harvey, R.P., 2002, “Patterning the vertebrate heart”, Nature Reviews Genetics, 3: 544–556. (Scholar)
  • Hoffman, B.D., C. Grashoff, and M.A. Schwartz, 2011, “Dynamic molecular processes mediate cellular mechanotransduction”, Nature, 475: 316–323. (Scholar)
  • Hopwood, N., 1999, “‘Giving body’ to embryos: modeling, mechanism, and the microtome in late nineteenth-century anatomy”, Isis, 90: 462–496. (Scholar)
  • –––, 2000, “Producing development: the anatomy of human embryos and the norms of Wilhelm His”, Bulletin of the History of Medicine, 74: 29–79. (Scholar)
  • –––, 2005, “Visual standards and disciplinary change: normal plates, tables and stages in embryology”, History of Science, 43: 239–303. (Scholar)
  • –––, 2007, “A history of normal plates, tables and stages in vertebrate embryology”, International Journal of Developmental Biology, 51: 1–26.
  • –––, 2019, “Inclusion and exclusion in the history of developmental biology”, Development, 146(7): dev175448. doi:10.1242/dev.175448 (Scholar)
  • Horder, T.J., J.A. Witkowski, and C.C. Wylie (eds), 1986, A History of Embryology, Cambridge: Cambridge University Press. (Scholar)
  • Hove, J.R., R.W. Köster, A.S. Forouhar, G. Acevedo-Bolton, S.E. Fraser, and M. Gharib, 2003, “Intracardiac fluid forces are an essential epigenetic factor for embryonic cardiogenesis”, Nature, 421: 172–177. (Scholar)
  • Huang, A., C.A. Scougall, J.W. Lowenthal, A.R. Jilbert, and I. Kotlarski, 2001, “Structural and functional homology between duck and chicken interferon-gamma”, Developmental and Comparative Immunology, 25: 55–68. (Scholar)
  • Hüttemann, A. and M.I. Kaiser., 2018, “Potentiality in biology”, in Handbook of Potentiality, K. Engelhardt and M. Quante (eds.), 401–428. Dordrecht: Springer. (Scholar)
  • Illari, P., and J. Williamson, 2012, “What is a mechanism? Thinking about mechanisms across the sciences”, European Journal of the Philosophy of Science, 2: 119–135. (Scholar)
  • Jackson, T.R., H.Y. Kim, U.L. Balakrishnan, C. Stuckenholz and L.A. Davidson, 2017, “Spatiotemporally controlled mechanical cues drive progenitor mesenchymal-to-epithelial transition enabling proper heart formation and function”, Current Biology, 27: 1326–1335. (Scholar)
  • Jones, M.R., 2005, “Idealization and abstraction: a framework”, in Idealization XII: Correcting the Model. Idealization and Abstraction in the Sciences (Poznan Studies in the Philosophy of the Sciences and the Humanities, vol. 86), M.R. Jones and N. Cartwright (eds.), 173–217. Amsterdam/New York: Rodopi. (Scholar)
  • Kaplan, J.M., 2008, “Phenotypic plasticity and reaction norms”, in Sarkar and Plutynski 2008: 205–222. (Scholar)
  • Keller, E.F., 2002, Making Sense of Life: Explaining Biological Development with Models, Metaphors, and Machines, Cambridge, MA: Harvard University Press. (Scholar)
  • Kimmel, C.B., W.W. Ballard, S.R. Kimmel, B. Ullmann, and T.F. Schilling, 1995, “Stages of embryonic development of the zebrafish”, Developmental dynamics, 203: 253–310. (Scholar)
  • Kingma, E., 2018, “Lady parts: the metaphysics of pregnancy”, Royal Institute of Philosophy Supplement, 82: 165–187. (Scholar)
  • Kirby, M.L., 1999, “Contribution of neural crest to heart and vessel morphology”, in Heart Development, R.P. Harvey and N. Rosenthal (eds.), 179–193. San Diego: Academic Publishers. (Scholar)
  • Kirschner, M.W., and J.C. Gerhart, 2005, The Plausibility of Life: Resolving Darwin’s Dilemma, New Haven and London: Yale University Press. (Scholar)
  • Kitcher, P., 1993, The Advancement of Science: Science Without Legend, Objectivity Without Illusions, New York: Oxford University Press. (Scholar)
  • Laplane, L., 2016, Cancer Stem Cells: Philosophy and Therapies, Cambridge, MA: Harvard University Press. (Scholar)
  • Levin, M., T. Thorlin, K.R. Robinson, T. Nogi, and M. Mercola, 2002, “Asymmetries in H+/K+ -ATPase and cell membrane potentials comprise a very early step in left-right patterning”, Cell, 111: 77–89. (Scholar)
  • Love, A.C., 2007, “Functional homology and homology of function: biological concepts and philosophical consequences”, Biology & Philosophy, 22: 691–708. (Scholar)
  • –––, 2008, “Explaining the ontogeny of form: philosophical issues”, in Sarkar and Plutynski 2008: 223–247. (Scholar)
  • –––, 2010, “Idealization in evolutionary developmental investigation: a tension between phenotypic plasticity and normal stages”, Philosophical Transactions of the Royal Society B: Biological Sciences, 365: 679–690. (Scholar)
  • –––, 2012, “Formal and material theories in philosophy of science: A methodological interpretation”, in EPSA Philosophy of Science: Amsterdam 2009 (The European Philosophy of Science Association Proceedings, Vol. 1), H.W. de Regt, S. Okasha, and S. Hartmann (eds.), 175–185. Berlin: Springer. (Scholar)
  • –––, 2013, “Theory is as theory does: Scientific practice and theory structure in biology”, Biological Theory, 7: 325–337. (Scholar)
  • –––, 2014, “The erotetic organization of development”, in Towards a Theory of Development, A. Minelli, and T. Pradeu (eds.), 33–55. Oxford: Oxford University Press. (Scholar)
  • –––, 2015, “Evolutionary developmental biology: philosophical issues”, in Handbook of Evolutionary Thinking in the Sciences, T. Heams, P. Huneman, L. Lecointre, and M. Silberstein (eds.), 265–283, Berlin: Springer. (Scholar)
  • –––, 2017a, “Developmental mechanisms”, in The Routledge Handbook of the Philosophy of Mechanisms and Mechanical Philosophy, S. Glennan and P. Illari (eds.), 332–347, New York: Routledge. (Scholar)
  • –––, 2017b, “Building integrated explanatory models of complex biological phenomena: from Mill’s methods to a causal mosaic”, in EPSA15 Selected Papers: The 5th conference of the European Philosophy of Science Association, M. Massimi, J.-W. Romeijn and G. Schurz (eds.), 221–232, Cham: Springer International Publishing. (Scholar)
  • Love, A.C., and M. Travisano, 2013, “Microbes modeling ontogeny”, Biology & Philosophy, 28: 161–188. (Scholar)
  • Lowe, J.W.E., 2015, “Managing variation in the investigation of organismal development: problems and opportunities”, History and Philosophy of the Life Sciences, 37: 449–473. (Scholar)
  • –––, 2016, “Normal development and experimental embryology: Edmund Beecher Wilson and Amphioxus”, Studies in History and Philosophy of Biological and Biomedical Sciences, 57: 44–59. (Scholar)
  • Lynch, V.J., 2009, “Use with caution: developmental systems divergence and potential pitfalls of animal models”, Yale Journal of Biology and Medicine, 82: 53–66. (Scholar)
  • Mabee, P.M., K.L. Olmstead, and C.C. Cubbage, 2000, “An experimental study of intrspecific variation, developmental timing, and heterochrony in fishes”, Evolution, 54: 2091–2106. (Scholar)
  • Maienschein, J., 1991, Transforming Traditions in American Biology, 1880–1915, Baltimore, MD: The Johns Hopkins University Press. (Scholar)
  • –––, 2000, “Competing epistemologies and developmental biology”, in Biology and Epistemology, R. Creath and J. Maienschein (eds.), 122–137. Cambridge: Cambridge University Press. (Scholar)
  • –––, 2014, Embryos under the Microscope: The Diverging Meanings of Life , Cambridge, MA: Harvard University Press. (Scholar)
  • Maienschein, J., M. Glitz, and G.E. Allen, 2005, Centennial History of the Carnegie Institution of Washington: Volume 5, The Department of Embryology, New York: Cambridge University Press. (Scholar)
  • Manak, J.R., and M.P. Scott, 1994, “A class act: conservation of homeodomain protein functions”, Development, (Supplement): 61–71.
  • McManus, F., 2012, “Development and mechanistic explanation”, Studies in History and Philosophy of Biological and Biomedical Sciences, 43: 532–541. (Scholar)
  • Metscher, B.D., and P.E. Ahlberg, 1999, “Zebrafish in context: uses of a laboratory model in comparative studies”, Developmental Biology, 210: 1–14. (Scholar)
  • Mill, J.S., 1843 [1974], A System of Logic Ratiocinative and Inductive, Being a Connected View of the Principles of Evidence and the Methods of Scientific Investigation (Books I–III), in The Collected Works of John Stuart Mill, Volume VII, John M. Robson (ed.), Toronto: University of Toronto Press, London: Routledge and Kegan Paul. [Mill 1843 [1974] available online] (Scholar)
  • Miller, C.J., and L.A. Davidson, 2013, “The interplay between cell signalling and mechanics in developmntal processes”, Nature Reviews Genetics, 14: 733–744. (Scholar)
  • Minelli, A., 2003, The Development of Animal Form: Ontogeny, Morphology, and Evolution, Cambridge: Cambridge University Press. (Scholar)
  • –––, 2011a, “Animal development, an open-ended segment of life”, Biological Theory, 6: 4–15. (Scholar)
  • –––, 2011b, “A principle of developmental inertia”, in Epigenetics: Linking Genotype and Phenotype in Development and Evolution, B. Halgrímsson and B.K. Hall (eds.), 116–133. San Francisco: University of California Press.
  • Minelli, A., C. Brena, G. Deflorian, D. Maruzzo, and G. Fusco, 2006, “From embryo to adult-beyond the conventional periodization of arthropod development”, Development Genes and Evolution, 216: 373–383. (Scholar)
  • Minelli, A. and T. Pradeu (eds.), 2014, Towards a Theory of Development, Oxford: Oxford University Press. (Scholar)
  • Mitchell, S.D., 2002, “Integrative pluralism”, Biology & Philosophy, 17: 55–70. (Scholar)
  • Moczek, A., 2008, “On the origins of novelty in development and evolution”, BioEssays, 30: 432–447. (Scholar)
  • Moczek, A.P., and L.M. Nagy, 2005, “Diverse developmental mechanisms contribute to different levels of diversity in horned beetles”, Evolution & Development, 7: 175–185. (Scholar)
  • Moczek, A.P., S. Sultan, S. Foster, C. Ledón-Rettig, I. Dworkin, H.F. Nijhout, E. Abouheif and D.W. Pfennig, 2011, “The role of developmental plasticity in evolutionary innovation”, Proceedings of the Royal Society of London B: Biological Sciences, 278: 2705–2713. (Scholar)
  • Morgan, T.H., 1923, “The modern theory of genetics and the problem of embryonic development”, Physiological Review, 3: 603–627. (Scholar)
  • –––, 1926, “Genetics and the physiology of development”, American Naturalist, 60: 489–515. (Scholar)
  • –––, 1934, Embryology and Genetics, New York: Columbia University Press. (Scholar)
  • Moss, L., 2002, What Genes Can’t Do, Cambridge, MA: MIT Press, A Bradford Book. (Scholar)
  • Müller, G.B., 2007, “Evo-devo: extending the evolutionary synthesis”, Nature Reviews Genetics, 8: 943–949. (Scholar)
  • Nagel, E., 1961, The Structure of Science: Problems in the Logic of Scientific Explanation, New York: Harcourt, Brace & World, Inc. (Scholar)
  • Neumann-Held, E.M., and C. Rehmann-Sutter (eds.), 2006, Genes in Development: Re-reading the Molecular Paradigm, Durham and London: Duke University Press. (Scholar)
  • Newman, S.A., 2015, “Development and evolution: The physics connection”, in Conceptual Change in Biology: Scientific and Philosophical Perspectives on Evolution and Development, A.C. Love (ed.), 421–440, Berlin: Springer. (Scholar)
  • Newman, S.A., and R. Bhat, 2008, “Dynamical patterning modules: physico-genetic determinants of morphological development and evolution”, Physical Biology, 5: 1–14. (Scholar)
  • Nonaka, S., H. Shiratori, Y. Saijoh, and H. Hamada, 2002, “Determination of left-right patterning of the mouse embryo by artificial nodal flow”, Nature, 418: 96–99. (Scholar)
  • Nüsslein-Volhard, C., 2006, Coming to Life: How Genes Drive Development, Carlsbad, CA: Kales Press. (Scholar)
  • Olby, R.C., 1986, “Structural and dynamical explanations in the world of neglected dimensions”, in Horder, Witkowski, and Wylie 1986: 275–308. (Scholar)
  • Olson, E.N., 2006, “Gene regulatory networks in the evolution and development of the heart”, Science, 313: 1922–1927. (Scholar)
  • O’Malley, M.A., 2007, “Exploratory experimentation and scientific practice: metagenomics and the proteorhodopsin case”, History and Philosophy of the Life Sciences, 29: 337–60. (Scholar)
  • Oppenheimer, J.M., 1967, Essays in the History of Embryology and Biology, Cambridge, MA: MIT Press. (Scholar)
  • Overton, J.A., 2013, “‘Explain’ in scientific discourse”, Synthese, 190: 1383–1405. (Scholar)
  • Owen, R., 1843, Lectures on the Comparative Anatomy and Physiology of the Invertebrate Animals, London: Longman, Brown, Green, and Longmans. (Scholar)
  • Pabst, D.A., 2000, “To bend a dolphin: convergence of force transmission designs in Cetaceans and Scombrid fishes”, American Zoologist, 40: 146–155. (Scholar)
  • Parkkinen, V-P., 2014, “Developmental explanations”, in New Directions in the Philosophy of Science: The Philosophy of Science in a European Perspective, Vol. 5, M.C. Galavotti, D. Dieks, W.J. Gonzalez, S. Hartmann, T. Uebel, and M. Weber (eds.), Berlin: Springer. (Scholar)
  • Pearson, C., 2018, “How-possibly explanation in biology: lessons from Wilhelm His’s ‘simple experiments’ models”, Philosophy, Theory, and Practice in Biology, 10(4), doi:10.3998/ptpbio.16039257.0010.004 (Scholar)
  • Peter, I.S., and E.H. Davidson, 2011, “A gene regulatory network controlling the embryonic specification of endoderm”, Nature, 474: 635–639.
  • Pigliucci, M., 2001, Phenotypic Plasticity: Beyond Nature and Nurture, Baltimore and London: The Johns Hopkins University Press. (Scholar)
  • –––, 2002, “Touchy and bushy: phenotypic plasticity and integration in response to wind stimulation in Arabidopsis thaliana”, International Journal of Plant Sciences, 163: 399–408. (Scholar)
  • Raff, R.A., 2000, “Evo-Devo: the evolution of a new discipline”, Nature Reviews Genetics, 1: 74–79. (Scholar)
  • Ranganayakulu, G., D.A. Elliott, R.P. Harvey, and E.N. Olson, 1998, “Divergent roles for NK-2 class homeobox genes in cardiogenesis in flies and mice”, Development, 125: 3037–3048. (Scholar)
  • Raya, Á., Y. Kawakami, C. Rodríguez-Esteban, M. Ibañes, D. Rasskin-Gutman, J. Rodríguez-León, D. Büscher, J.A. Feijó, and J.C.I. Belmonte, 2004, “Notch activity acts as a sensor for extracellular calcium during vertebrate left-right determination”, Nature, 427: 121–128. (Scholar)
  • Reed, R.D., P-H. Chen, and H.F Nijhout, 2007, “Cryptic variation in butterfly eyespot development: the importance of sample size in gene expression studies”, Evolution & Development, 9: 2–9. (Scholar)
  • Reiss, J.O., 2003, “Time”, in Keywords and Concepts in Evolutionary Developmental Biology, B.K. Hall, and W.M. Olson (eds.), 359–368. Cambridge, MA: Harvard University Press. (Scholar)
  • Robert, J.S., 2004, Embryology, Epigenesis, and Evolution: Taking Development Seriously, New York: Cambridge University Press. (Scholar)
  • Roe, S.A., 1981, Matter, Life, and Generation: 18th Century Embryology and the Haller-Wolff Debate, Cambridge: Cambridge University Press. (Scholar)
  • Rosenberg, A., 2006, Darwinian Reductionism: Or, How to Stop Worrying and Love Molecular Biology, Chicago: University of Chicago Press. (Scholar)
  • Rubin, G.M., 1988, Drosophila melanogaster as an experimental organism. Science, 240: 1453–1459. (Scholar)
  • Sarkar, S. and A. Plutynski (eds.), 2008, A Companion to the Philosophy of Biology, (Blackwell Companions to Philosophy), Malden, MA: Blackwell Publishers. (Scholar)
  • Savin, T., N.A. Kurpios, A.E. Shyer, P. Florescu, H. Liang, L. Mahadevan, and C. Tabin, 2011, “On the growth and form of the gut”, Nature, 476: 57–62. (Scholar)
  • Scheiner, S.M., 1993, “Genetics and evolution of phenotypic plasticity”, Annual Review of Ecology and Systematics, 24: 35–68. (Scholar)
  • Schulze, J., and E. Schierenberg, 2011, “Evolution of embryonic development in nematodes”, EvoDevo, 2: 18. (Scholar)
  • Sheil, C.A., and E. Greenbaum, 2005, “Reconsideration of skeletal development of Chelydra serpentina (Reptilia: Testudinata: Chelydridae): evidence for intraspecific variation”, Journal of Zoology, 265: 235–267. (Scholar)
  • Sidzinska, M., 2017, “Not one, not two: toward an ontology of pregnancy”, Feminist Philosophy Quarterly, 3(4), Article 2, doi:10.5206/fpq/2017.4.2 (Scholar)
  • Slack, J.M.W., 2006, Essential Developmental Biology, 2nd ed. Malden, MA: Blackwell Publishing. (Scholar)
  • –––, 2009, “Emerging market organisms”, Science, 323: 1674–1675. (Scholar)
  • –––, 2013, Essential Developmental Biology, 3rd edition, Chichester: Wiley-Blackwell. (Scholar)
  • Smith, J.E.H. (ed.), 2006, The Problem of Animal Generation in Early Modern Philosophy, New York: Cambridge University Press. (Scholar)
  • –––, 2011, Divine Machines: Leibniz and the Sciences of Life, Princeton, NJ: Princeton University Press. (Scholar)
  • Sober, E., 1988, “Apportioning causal responsibility”, Journal of Philosophy, 85: 303–318. (Scholar)
  • Sommer, R.J., 2009, “The future of evo-devo: model systems and evolutionary theory”, Nature Reviews Genetics, 10: 416–422. (Scholar)
  • Srivastava, D., 2006, “Making or breaking the heart: from lineage determination to morphogenesis”, Cell, 126: 1037–1048. (Scholar)
  • Steel, D.P., 2008, Across the Boundaries: Extrapolation in Biology and Social Science, New York: Oxford University Press. (Scholar)
  • Strevens, M., 2009, Depth: An Account of Scientific Explanation, Cambridge, MA: Harvard University Press. (Scholar)
  • Thompson, D’A.W. 1992 [1942]. On Growth and Form, Complete Revised Edition. New York: Dover Publications, Inc. (Scholar)
  • Varner, V.D., and C.M. Nelson, 2014, “Cellular and physical mechanisms of branching morphogenesis”, Development, 141: 2750–2759. (Scholar)
  • Vázquez-Novelle, M.D., V. Esteban, A. Bueno, and M.P. Sacristán., 2005, “Functional homology among human and fission yeast Cdc14 phosphatases”, Journal of Biological Chemistry, 280: 29144–29150. (Scholar)
  • Von Dassow, M., J. Strother, and L.A. Davidson, 2010, “Surprisingly simple mechanical behavior of a complex embryonic tissue”, PLoS ONE, 5:e15359. (Scholar)
  • Waters, C.K., 2007a, “Causes that make a difference”, Journal of Philosophy, 104: 551–579. (Scholar)
  • –––, 2007b, “The nature and context of exploratory experimentation”, History and Philosophy of the Life Sciences, 29: 275–284. (Scholar)
  • Weber, M., 2005, Philosophy of Experimental Biology, New York: Cambridge University Press. (Scholar)
  • Weisberg, M., 2007, “Three kinds of idealization”, Journal of Philosophy, 104: 639–659. (Scholar)
  • West-Eberhard, M.J., 2003, Developmental Plasticity and Evolution, New York: Oxford University Press. (Scholar)
  • Wimsatt, W.C., 1980, “Reductionistic research strategies and their biases in the units of selection controversy”, in Scientific Discovery: Case Studies, T. Nickles (ed.), 213–259. Dordrecht: D. Reidel Publishing Company. (Scholar)
  • Wolpert, L., R. Beddington, J. Brockes, T. Jessell, P.A. Lawrence, and E.M. Meyerowitz, 1998, Principles of Development, New York: Oxford University Press. (Scholar)
  • Wolpert, L., C. Tickle, T. Jessell, P. Lawrence, E. Meyerowitz, E. Robertson, and J. Smith, 2010, Principles of Development, 4th ed. New York and Oxford: Oxford University Press. (Scholar)
  • Woodward, J., 2003, Making Things Happen: A Theory of Causal Explanation, New York: Oxford University Press. (Scholar)
  • Wouters, A., 2003, “Four notions of biological function”, Studies in the History and Philosophy of Biological and Biomedical Sciences, 34: 633–668. (Scholar)
  • –––, 2005, “The function debate in philosophy”, Acta Biotheoretica, 53: 123–151. (Scholar)
  • Wozniak, M., and C.S. Chen, 2009, “Mechanotransduction in development: a growing role for contractility”, Nature Reviews Molecular Cell Biology, 10: 34–43. (Scholar)
  • Yoshida, Y., forthcoming, “Multiple-models juxtaposition and trade-offs among modeling desiderata”, Philosophy of Science. (Scholar)

Figure Credits

Generated Sun Aug 2 11:18:42 2020