Linked bibliography for the SEP article "Theories of Biological Development" by Melinda Bonnie Fagan and Jane Maienschein

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If everything goes well, this page should display the bibliography of the aforementioned article as it appears in the Stanford Encyclopedia of Philosophy, but with links added to PhilPapers records and Google Scholar for your convenience. Some bibliographies are not going to be represented correctly or fully up to date. In general, bibliographies of recent works are going to be much better linked than bibliographies of primary literature and older works. Entries with PhilPapers records have links on their titles. A green link indicates that the item is available online at least partially.

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Agutter, Paul S., P. Colm Malone, and Denys N. Wheatley, 2000, “Diffusion Theory in Biology: A Relic of Mechanistic Materialism”, Journal of the History of Biology, 33(1): 71–111. doi:10.1023/a:1004745516972 (Scholar)
Aristotle, [GA] De Generatione Animalium. Translated as Generation of Animals, Greek and English, A. L. Peck (trans.), (Loeb Classical Library 366), Cambridge, MA: Harvard University Press, 1979.
Baedke, Jan, 2013, “The Epigenetic Landscape in the Course of Time: Conrad Hal Waddington’s Methodological Impact on the Life Sciences”, Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences, 44(4): 756–773. doi:10.1016/j.shpsc.2013.06.001 (Scholar)
–––, 2018, Above the Gene, beyond Biology: Toward a Philosophy of Epigenetics, Pittsburgh, PA: University of Pittsburgh Press. (Scholar)
Bard, Jonathan, 2011, “A Systems Biology Representation of Developmental Anatomy”, Journal of Anatomy, 218(6): 591–599. doi:10.1111/j.1469-7580.2011.01371.x (Scholar)
–––, 2013, “Driving Developmental and Evolutionary Change: A Systems Biology View”, Progress in Biophysics and Molecular Biology, 111(2–3): 83–91. doi:10.1016/j.pbiomolbio.2012.09.006 (Scholar)
Berestycki, Henri, 2013, “Alan Turing and Reaction-Diffusion Equations”, in S. B. Cooper and van Leeuwen 2013: 723–732. (Scholar)
von Bertalanffy, Ludwig von, 1928 [1933], Kritische Theorie der Formenbildung, Berlin: Gebruder Borntraeger. Translated as Modern Theories of Development: An Introduction to Theoretical Biology, J. H. Woodger (trans.), London: Oxford University Press, 1933. (Scholar)
Beurton, Peter J., Raphael Falk, and Hans-Jörg Rheinberger (eds.), 2000, The Concept of the Gene in Development and Evolution: Historical and Epistemological Perspectives, Cambridge: Cambridge University Press. doi:10.1017/cbo9780511527296 (Scholar)
Bonner, John Tyler, 1974, On Development: The Biology of Form, Cambridge, MA: Harvard University Press. (Scholar)
Bowler, Peter J., 1971, “Preformation and Pre-Existence in the Seventeenth Century: A Brief Analysis”, Journal of the History of Biology, 4(2): 221–244. doi:10.1007/bf00138311 (Scholar)
–––, 1975, “The Changing Meaning of ‘Evolution’”, Journal of the History of Ideas, 36(1): 95–114. doi:10.2307/2709013 (Scholar)
Brandt, Christina, 2010, “The Metaphor of ‘Nuclear Reprogramming’: 1970’s Cloning Research and Beyond”, in Hereditary Hourglass. Genetics and Epigenetics, 1868–2000, Ana Barahona, Edna Suárez Díaz, and Hans-Jörg Rheinberger (eds.), Berlin: Max Planck Institute for History of Science, 85–95. (Scholar)
Briggs, Robert and Thomas J. King, 1952, “Transplantation of Living Nuclei from Blastula Cells into Enucleated Frogs’ Eggs”, Proceedings of the National Academy of Sciences, 38(5): 455–463. doi:10.1073/pnas.38.5.455 (Scholar)
Burian, Richard M., 2005, The Epistemology of Development, Evolution, and Genetics, Cambridge/New York: Cambridge University Press. doi:10.1017/cbo9780511610271 (Scholar)
–––, 2014 “Foreword: A Philosopher’s View”, in Minelli and Pradeu 2014a: xi–xiii. (Scholar)
Burian, Richard M. and Denis Thieffry (eds), 2000, From Embryology to Developmental Biology, special issue of History and Philosophy of the Life Sciences, 22(3). (Scholar)
Churchill, Frederick Barton, 1966, “Wilhelm Roux and a Program for Embryology”, Ph.D. dissertation, Cambridge, MA: Harvard University. (Scholar)
–––, 1973, “Chabry, Roux, and the experimental method in nineteenth century embryology”, in Foundations of the Scientific Method: the Nineteenth Century, Ronald N. Giere and Richard S. Westfall (eds), Bloomington, IN: Indiana University Press, 161–205. (Scholar)
–––, 2015, August Weismann: Development, Heredity, and Evolution, Cambridge, MA: Harvard University Press. (Scholar)
Connell, Sophia M., 2016, Aristotle on Female Animals: A Study of the “Generation of Animals”, Cambridge: Cambridge University Press. doi:10.1017/cbo9781316479766 (Scholar)
–––, 2020, “The Female Contribution to Generation and Nutritive Soul in Aristotle’s Embryology”, in Nutrition and Nutritive Soul in Aristotle and Aristotelianism, Giouli Korobili and Roberto Lo Presti (eds.), Berlin: De Gruyter, 63–84. doi:10.1515/9783110690552-006 (Scholar)
Cooper, Melinda, 2003, “Rediscovering the Immortal Hydra : Stem Cells and the Question of Epigenesis”, Configurations, 11(1): 1–26. doi:10.1353/con.2004.0010 (Scholar)
Cooper, S. Barry and Jan van Leeuwen (eds.), 2013, Alan Turing: His Work and Impact, Waltham, MA: Elsevier. doi:10.1016/c2010-0-66380-2 (Scholar)
Crick, Francis, 1970, “Diffusion in Embryogenesis”, Nature, 225(5231): 420–422. doi:10.1038/225420a0 (Scholar)
Darwin, Charles, 1859, On the Origin of Species, London: John Murray. [Darwin 1859 available online] (Scholar)
Davidson, Eric H., 1968, Gene Activity in Early Development, first edition, New York: Academic Press. Second edition, 1976; third edition, 1986. (Scholar)
–––, 2001, Genomic Regulatory Systems: Development and Evolution, San Diego, CA: Academic Press. (Scholar)
–––, 2006, The Regulatory Genome: Gene Regulatory Networks in Development and Evolution, Burlington, MA ; San Diego: Academic Press. (Scholar)
Davidson, Eric H. and Michael S. Levine, 2008, “Properties of Developmental Gene Regulatory Networks”, Proceedings of the National Academy of Sciences, 105(51): 20063–20066. doi:10.1073/pnas.0806007105 (Scholar)
Detlefsen, Karen, 2006, “Explanation and Demonstration in the Haller-Wolff Debate”, in The Problem of Animal Generation in Early Modern Philosophy, Justin E. H. Smith (ed.), Cambridge: Cambridge University Press, 235–261. doi:10.1017/cbo9780511498572.012 (Scholar)
Driesch, Hans, 1892 [1964], “Entwicklungsmechanische Studien. I. Der Werth der beiden ersten Furchungszellen in der Echinodermentwicklung. Experimentelle Erzeugen von Theil- und Doppelbildung”, Zeitschrift für wissenschafliche Zoologie, 53: 160–178. Abridged translation as “The Potency of the First Two Cleavage Cells in Echinoderm Development. Experimental Production of Partial and Double Formations.” L. Mezger, M. Hamburger, V. Hamburger, and T.S. Hall (trans.), in Willier and Oppenheimer 1964: 38–50. (Scholar)
Driever, Wolfgang and Christiane Nüsslein-Volhard, 1988, “The bicoid Protein Determines Position in the Drosophila Embryo in a Concentration-Dependent Manner”, Cell, 54(1): 95–104. doi:10.1016/0092-8674(88)90183-3 (Scholar)
Dröscher, Ariane, 2014, “Images of Cell Trees, Cell Lines, and Cell Fates: The Legacy of Ernst Haeckel and August Weismann in Stem Cell Research”, History and Philosophy of the Life Sciences, 36(2): 157–186. doi:10.1007/s40656-014-0028-8 (Scholar)
Fagan, Melinda Bonnie, 2012, “Waddington Redux: Models and Explanation in Stem Cell and Systems Biology”, Biology & Philosophy, 27(2): 179–213. doi:10.1007/s10539-011-9294-y (Scholar)
–––, 2013a, Philosophy of Stem Cell Biology: Knowledge in Flesh and Blood, New York: Palgrave Macmillan. doi:10.1057/9781137296023 (Scholar)
–––, 2013b, “The Stem Cell Uncertainty Principle”, Philosophy of Science, 80(5): 945–957. doi:10.1086/674014 (Scholar)
–––, 2016, “Stem Cells and Systems Models: Clashing Views of Explanation”, Synthese, 193(3): 873–907. doi:10.1007/s11229-015-0776-3 (Scholar)
–––, 2017, “Stem Cell Lineages: Between Cell and Organism”, Ontologies of Living Beings special issue of Philosophy, Theory, and Practice in Biology, 9: article 6. doi:10.3998/ptb.6959004.0009.006 (Scholar)
Falcon, Andrea and David Lefebvre (eds.), 2017, Aristotle’s “Generation of Animals”: A Critical Guide, Cambridge: Cambridge University Press. doi:10.1017/9781316459386 (Scholar)
Farley, John, 1977, The Spontaneous Generation Controversy from Descartes to Oparin, Baltimore, MD: Johns Hopkins University Press. (Scholar)
Forgacs, Gabor and Stuart Newman, 2005, Biological Physics of the Developing Embryo, Cambridge/New York: Cambridge University Press. (Scholar)
Fry, Iris, 2000, The Emergence of Life on Earth: A Historical and Scientific Overview, New Brunswick, NJ: Rutgers University Press. (Scholar)
Fusco, Giuseppe, Roberto Carrer, and Emanuele Serrelli, 2014, “The Landscape Metaphor in Development”, in Minelli and Pradeu 2014a: 114–128 (chap. 7). (Scholar)
Gearhart, John, 1998, “New Potential for Human Embryonic Stem Cells”, Science, 282(5391): 1061–1062. doi:10.1126/science.282.5391.1061 (Scholar)
Gilbert, Scott F., 1991, “Epigenetic Landscaping: Waddington’s Use of Cell Fate Bifurcation Diagrams”, Biology & Philosophy, 6(2): 135–154. doi:10.1007/bf02426835 (Scholar)
–––, 2004, “Foreword”, in Crystals, Fabrics, and Fields: Metaphors that Shape Embryos, by Donna Jeanne Haraway, Berkeley, CA: North Atlantic Books, pages xi–xv. (Scholar)
Gilbert, Scott F., John M. Opitz, and Rudolf A. Raff, 1996, “Resynthesizing Evolutionary and Developmental Biology”, Developmental Biology, 173(2): 357–372. doi:10.1006/dbio.1996.0032 (Scholar)
Goodwin, Brian C., 1965, “Oscillatory Behavior in Enzymatic Control Processes”, Advances in Enzyme Regulation, 3: 425–437. doi:10.1016/0065-2571(65)90067-1 (Scholar)
Goodwin, Brian C. and Lynn E. H. Trainor, 1985, “Tip and Whorl Morphogenesis in ‘Acetabularia’ by Calcium-Regulated Strain Fields”, Journal of Theoretical Biology, 117(1): 79–106. doi:10.1016/s0022-5193(85)80165-x (Scholar)
Griesemer, James R., 2000a, “Development, Culture, and the Units of Inheritance”, Philosophy of Science, 67(S3): S348–S368. doi:10.1086/392831 (Scholar)
–––, 2000b, “Reproduction and the Reduction of Genetics”, in Beurton, Falk, and Rheinberger 2000: 240–285. doi:10.1017/cbo9780511527296.013 (Scholar)
–––, 2014a, “Reproduction and the Scaffolded Development of Hybrids”, in Developing Scaffolds in Evolution, Culture, and Cognition, Linnda R. Caporael, James R. Griesemer, and William C. Wimsatt (eds.), Cambridge, MA: The MIT Press, 23–56. doi:10.7551/mitpress/9780262019552.003.0002 (Scholar)
–––, 2014b, “Reproduction and Scaffolded Developmental Processes: An Integrated Evolutionary Perspective” in Minelli and Pradeu 2014a: 183–202 (chap. 12). (Scholar)
Griffiths, Paul E. and Robin D. Knight, 1998, “What Is the Developmentalist Challenge?”, Philosophy of Science, 65(2): 253–258. doi:10.1086/392636 (Scholar)
Gurdon, J. B. and Alan Colman, 1999, “The Future of Cloning”, Nature, 402(6763): 743–746. doi:10.1038/45429 (Scholar)
Haeckel, Ernst, 1866, Generelle Morphologie der Organismen : allgemeine Grundzüge der organischen Formen-Wissenschaft, mechanisch begründet durch die von Charles Darwin reformirte Descendenz-Theorie, Berlin: G. Reimer. (Scholar)
Haraway, Donna Jeanne, 1976 [2004], Crystals, Fabrics, and Fields: Metaphors of Organicism in Twentieth-Century Developmental Biology, New Haven, CT: Yale University Press. Reprinted Berkeley, CA: North Atlantic Books, 2004. (Scholar)
Harrison, Ross G., 1969, Organization and Development of the Embryo, Sally Wilens (ed.), (Yale University. Mrs. Hepsa Ely Silliman Memorial Lectures), New Haven, CT: Yale University Press. (Scholar)
Henry, Devin, 2017, “Aristotle on Epigenesis: Two Senses of Epigenesis”, in Falcon and Lefebvre 2017: 89–107. doi:10.1017/9781316459386.007 (Scholar)
Hertwig, Oscar, 1894 [1900], Zeit- und Streitfragen der Biologie, 2 vols., Jena: Gustav Fischer. Translated as The Biological Problem of Today: Preformation or Epigenesis? The Basis of a Theory of Organic Development, by Professor Dr. Oscar Hertwig, P. Chalmers Mitchell (trans.), New York: The Macmillan Company, 1900. doi:10.5962/bhl.title.1492 (Scholar)
Hopwood, Nick, Rebecca Flemming, and Lauren Kassell (eds.), 2018, Reproduction: Antiquity to the Present Day, Cambridge: Cambridge University Press. (Scholar)
Jacob, François, 1970 [1973], La logique du vivant: une histoire de l’hérédité, (Bibliothèque des sciences humaines), Paris: Gallimard. Translated as The Logic of Life: A History of Heredity, Betty E. Spillmann (trans.), New York: Pantheon Books, 1973. (Scholar)
Jacob, François and Jacques Monod, 1961a, “On the Regulation of Gene Activity”, Cold Spring Harbor Symposia on Quantitative Biology, 26: 193–211. doi:10.1101/SQB.1961.026.01.024 (Scholar)
–––, 1961b, “Genetic Regulatory Mechanisms in the Synthesis of Proteins”, Journal of Molecular Biology, 3(3): 318–356. doi:10.1016/s0022-2836(61)80072-7 (Scholar)
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Jaeger, Johannes and James Sharpe, 2014, “On the Concept of Mechanism in Development”, in Minelli and Pradeu 2014a: 56–78 (chap. 4). (Scholar)
Judson, Horace Freeland, 1979, The Eighth Day of Creation: Makers of the Revolution in Biology, New York: Simon and Schuster. (Scholar)
Keller, Evelyn Fox, 1983, “The Force of the Pacemaker Concept in Theories of Aggregation in Cellular Slime Mold”, Perspectives in Biology and Medicine, 26(4): 515–521. doi:10.1353/pbm.1983.0049 (Scholar)
–––, 2002, Making Sense of Life: Explaining Biological Development with Models, Metaphors, and Machines, Cambridge, MA: Harvard University Press. (Scholar)
Kondo, Shigeru and Takashi Miura, 2010, “Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation”, Science, 329(5999): 1616–1620. doi:10.1126/science.1179047 (Scholar)
Laubichler, Manfred D. and Günter P. Wagner, 2001, “How Molecular Is Molecular Developmental Biology? A Reply to Alex Rosenberg’s ‘Reductionism Redux: Computing the Embryo’”, Biology & Philosophy, 16(1): 53–68. doi:10.1023/a:1006750126784 (Scholar)
Lennox, James G. (ed.), 2001, Aristotle: On the Parts of Animals I–IV, Oxford: Clarendon Press. (Scholar)
Lenoir, Timothy, 1982, The Strategy of Life: Teleology and Mechanics in Nineteenth Century German Biology, Dordrecht, Holland: D. Reidel Publishing Company. doi:10.1007/978-94-009-6951-3 (Scholar)
Lillie, Frank R., 1927, “The Gene and the Ontogenetic Process”, Science, 66(1712): 361–368. doi:10.1126/science.66.1712.361 (Scholar)
Maienschein, Jane, 1991a, “T.H. Morgan’s Regeneration, Epigenesis, and (W)Holism”, in A History of Regeneration Research: Milestones in the Evolution of a Science, Charles E. Dinsmore (ed.), Cambridge/New York: Cambridge University Press, 133–149. (Scholar)
–––, 1991b, “The Origins of Entwicklungsmechanik,” in Scott Gilbert, editor, A Conceptual History of Modern Developmental Biology, New York: Plenum Press, 43–61. (Scholar)
–––, 2000, “Competing Epistemologies and Developmental Biology”, in Biology and Epistemology, Richard Creath and Jane Maienschein (eds.), Cambridge/New York: Cambridge University Press, 122–137. (Scholar)
–––, 2003, Whose View of Life? Embryos, Cloning, and Stem Cells, Cambridge, MA: Harvard University Press. (Scholar)
Maienschein, Jane and Kate MacCord, 2022, What is Regeneration?, Chicago: University of Chicago Press. (Scholar)
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Minelli, Alessandro, 2009, Perspectives in Animal Phylogeny and Evolution, (Oxford Biology), Oxford/New York: Oxford University Press. doi:10.1093/acprof:oso/9780198566205.001.0001 (Scholar)
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Minelli, Alessandro and Thomas Pradeu (eds.), 2014a, Towards a Theory of Development, Oxford: Oxford University Press. doi:10.1093/acprof:oso/9780199671427.001.0001 (Scholar)
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