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  1.  19
    Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.J. D. Munkvold, R. A. Greene, C. E. Bermudez-Kandianis, C. M. La Rota, H. Edwards, S. F. Sorrells, T. Dake, D. Benscher, R. Kantety, A. M. Linkiewicz, J. Dubcovsky, E. D. Akhunov, J. Dvořák, Miftahudin, J. P. Gustafson, M. S. Pathan, H. T. Nguyen, D. E. Matthews, S. Chao, G. R. Lazo, D. D. Hummel, O. D. Anderson, J. A. Anderson, J. L. Gonzalez-Hernandez, J. H. Peng, N. Lapitan, L. L. Qi, B. Echalier, B. S. Gill, K. G. Hossain, V. Kalavacharla, S. F. Kianian, D. Sandhu, M. Erayman, K. S. Gill, P. E. McGuire, C. O. Qualset & M. E. Sorrells - unknown
    The focus of this study was to analyze the content, distribution, and comparative genome relationships of 996 chromosome bin-mapped expressed sequence tags accounting for 2266 restriction fragments on the homoeologous group 3 chromosomes of hexaploid wheat. Of these loci, 634, 884, and 748 were mapped on chromosomes 3A, 3B, and 3D, respectively. The individual chromosome bin maps revealed bins with a high density of mapped ESTs in the distal region and bins of low density in the proximal region of the (...)
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  2.  20
    A 2600-locus chromosome bin map of wheat homoeologous group 2 reveals interstitial gene-rich islands and colinearity with rice. [REVIEW]E. J. Conley, V. Nduati, J. L. Gonzalez-Hernandez, A. Mesfin, M. Trudeau-Spanjers, S. Chao, G. R. Lazo, D. D. Hummel, O. D. Anderson, L. L. Qi, B. S. Gill, B. Echalier, A. M. Linkiewicz, J. Dubcovsky, E. D. Akhunov, J. Dvořák, J. H. Peng, N. L. V. Lapitan, M. S. Pathan, H. T. Nguyen, X. -F. Ma, Miftahudin, J. P. Gustafson, R. A. Greene, M. E. Sorrells, K. G. Hossain, V. Kalavacharla, S. F. Kianian, D. Sidhu, M. Dilbirligi, K. S. Gill, D. W. Choi, R. D. Fenton, T. J. Close, P. E. McGuire, C. O. Qualset & J. A. Anderson - unknown
    The complex hexaploid wheat genome offers many challenges for genomics research. Expressed sequence tags facilitate the analysis of gene-coding regions and provide a rich source of molecular markers for mapping and comparison with model organisms. The objectives of this study were to construct a high-density EST chromosome bin map of wheat homoeologous group 2 chromosomes to determine the distribution of ESTs, construct a consensus map of group 2 ESTs, investigate synteny, examine patterns of duplication, and assess the colinearity with rice (...)
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  3.  28
    Development of an expressed sequence tag resource for wheat : EST generation, unigene analysis, probe selection and bioinformatics for a 16,000-locus bin-delineated map. [REVIEW]G. R. Lazo, S. Chao, D. D. Hummel, H. Edwards, C. C. Crossman, N. Lui, D. E. Matthews, V. L. Carollo, D. L. Hane, F. M. You, G. E. Butler, R. E. Miller, T. J. Close, J. H. Peng, N. L. V. Lapitan, J. P. Gustafson, L. L. Qi, B. Echalier, B. S. Gill, M. Dilbirligi, H. S. Randhawa, K. S. Gill, R. A. Greene, M. E. Sorrells, E. D. Akhunov, J. Dvořák, A. M. Linkiewicz, J. Dubcovsky, K. G. Hossain, V. Kalavacharla, S. F. Kianian, A. A. Mahmoud, Miftahudin, X. -F. Ma, E. J. Conley, J. A. Anderson, M. S. Pathan, H. T. Nguyen, P. E. McGuire, C. O. Qualset & O. D. Anderson - unknown
    This report describes the rationale, approaches, organization, and resource development leading to a large-scale deletion bin map of the hexaploid wheat genome. Accompanying reports in this issue detail results from chromosome bin-mapping of expressed sequence tags representing genes onto the seven homoeologous chromosome groups and a global analysis of the entire mapped wheat EST data set. Among the resources developed were the first extensive public wheat EST collection. Described are protocols for sequencing, sequence processing, EST nomenclature, and the assembly of (...)
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