According to a recent suggestion, the names of gene taxa should be conceived of as referring to individuals with concrete genes as their parts, just as the names of biological species are often understood as denoting individuals with organisms as their parts. Although prima facie this suggestion might advance the debate on gene concepts in a similar way as the species-are-individuals thesis advanced the debate on species concepts, I argue that the principal arguments in support of the gene-individuality thesis are (...) much less compelling than the parallel arguments in the species case. In addition, I argue that the notion of biological function invoked in the gene-individuality thesis (selected effect) is not the one that biologists actually use when individuating genes. Contra the gene-individuality thesis, I argue that gene names refer to kinds, defined primarily (though not exclusively) by causal-role functions. (shrink)

This paper, addressed to both philosophers of science and stem cell biologists, aims to reduce the obscurity of and disagreements over the nature of stemness. The two most prominent current theories of stemness—the entity theory and the state theory—are both biologically and philosophically unsatisfactory. Improved versions of these theories are likely to converge. Philosophers of science can perform a much needed service in clarifying and formulating ways of testing entity and state theories of stemness. To do so, however, philosophers should (...) acquaint themselves with the latest techniques and approaches employed by bench scientists, such as the use of proteomics, genome-wide association studies, and ChIP-on-chip arrays. An overarching theme of this paper is the desirability of bringing closer together the philosophy of science and the practice of scientific research. (shrink)

The rosy dawn of my title refers to that optimistic time when the logical concept of a natural kind originated in Victorian England. The scholastic twilight refers to the present state of affairs. I devote more space to dawn than twilight, because one basic problem was there from the start, and by now those origins have been forgotten. Philosophers have learned many things about classification from the tradition of natural kinds. But now it is in disarray and is unlikely to (...) be put back together again. My argument is less founded on objections to the numerous theories now in circulation, than on the sheer proliferation of incompatible views. There no longer exists what Bertrand Russell called ‘the doctrine of natural kinds’—one doctrine. Instead we have a slew of distinct analyses directed at unrelated projects. (shrink)

In this thesis I argue that we should break with the dominant Kripkean tradition concerning natural kind terms and theoretical identity. I claim that there is just no interesting connection between the metaphysics and semantics of natural kind terms, and demonstrate this by constructing a version of descriptivism that is combined with the same metaphysics – that is, a nontrivial version of essentialism – found in Kripke, but which effectively avoids all of the standard criticisms. With my version of descriptivism (...) in place, I present what I take to be the most reasonable version of metaphysical essentialism, positing only what I call 'thin' essences. I claim that thin essences are perfectly adequate to underpin scientific realism, and moreover that they are sufficient to support the version of descriptivism developed here. In effect, what I offer here is an error theory of the Kripkean tradition: Kripke is right to think that there are interesting things to say about meaning and essence, but just wrong about what those things are. Thus whilst Kripke thinks that it is possible to make discoveries about the meanings of natural kind terms, I think, rather, that we make empirical discoveries that lead to revisions in meaning. Furthermore, whilst Kripke thinks there is a dichotomy between de re and de dicto necessity, and that theoretical identities are necessary de re, I think this distinction is both misleading and inaccurate, and that the necessity of theoretical identities is neither entirely de re nor entirely de dicto. By separating and insulating questions concerning meaning from questions concerning essence I show that whilst scientific discoveries are contingent and a posteriori, the definition of scientific terms are both necessary and a priori. (shrink)

In robustness analysis, hypotheses are supported to the extent that a result proves robust, and a result is robust to the extent that we detect it in diverse ways. But what precise sense of diversity is at work here? In this paper, I show that the formal explications of evidential diversity most often appealed to in work on robustness – which all draw in one way or another on probabilistic independence – fail to shed light on the notion of diversity (...) relevant to robustness analysis. I close by briefly outlining a promising alternative approach inspired by Horwich’s (1982) eliminative account of evidential diversity. (shrink)

In Western common sense, one speaks of there being five human senses, a claim apparently challenged by the biological and psychological sciences. Part of this challenge comes in the form of claiming the existence of additional senses. Part of the challenge comes from positing multiple senses where common sense only speaks of one, such as with the fractionation of “touch” into pressure and temperature senses. One conceptual difficulty in thinking about the number and division of senses is that it's not (...) clear whether the different senses constitute natural kinds and, if not, what kind of kind they are. Should we favor antirealism with respect to the senses, akin to the arguments of some concerning the nature of species or race? I will argue that this first problem is compounded by another: that we ought to be pluralists with respect to the senses—what is meant by the term “sense” varies from context to context, varying even between scientific contexts. (shrink)