Results for 'Justin Preece'

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  1. Ontologies as Integrative Tools for Plant Science.Ramona Walls, Balaji Athreya, Laurel Cooper, Justin Elser, Maria A. Gandolfo, Pankaj Jaiswal, Christopher J. Mungall, Justin Preece, Stefan Rensing, Barry Smith & Dennis W. Stevenson - 2012 - American Journal of Botany 99 (8):1263–1275.
    Bio-ontologies are essential tools for accessing and analyzing the rapidly growing pool of plant genomic and phenomic data. Ontologies provide structured vocabularies to support consistent aggregation of data and a semantic framework for automated analyses and reasoning. They are a key component of the Semantic Web. This paper provides background on what bio-ontologies are, why they are relevant to botany, and the principles of ontology development. It includes an overview of ontologies and related resources that are relevant to plant science, (...)
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  2. The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Laurel Cooper, Austin Meier, Marie-Angélique Laporte, Justin L. Elser, Chris Mungall, Brandon T. Sinn, Dario Cavaliere, Seth Carbon, Nathan A. Dunn, Barry Smith, Botong Qu, Justin Preece, Eugene Zhang, Sinisa Todorovic, Georgios Gkoutos, John H. Doonan, Dennis W. Stevenson, Elizabeth Arnaud & Pankaj Jaiswal - 2018 - Nucleic Acids Research 46 (D1):D1168–D1180.
    The Planteome project provides a suite of reference and species-specific ontologies for plants and annotations to genes and phenotypes. Ontologies serve as common standards for semantic integration of a large and growing corpus of plant genomics, phenomics and genetics data. The reference ontologies include the Plant Ontology, Plant Trait Ontology, and the Plant Experimental Conditions Ontology developed by the Planteome project, along with the Gene Ontology, Chemical Entities of Biological Interest, Phenotype and Attribute Ontology, and others. The project also provides (...)
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  3. The Plant Ontology as a tool for comparative plant anatomy and genomic analyses.Cooper Laurel, Walls Ramona, L. Elser, Justin Gandolfo, A. Maria, Stevenson Dennis, W. Smith, Barry Preece, Justin Athreya, Balaji Mungall, J. Christopher, Rensing Stefan & Others - 2012 - Plant and Cell Physiology.
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  4. Oxford Handbook of Chinese Philosophy.Justin Tiwald (ed.) - forthcoming - New York: Oxford University Press.
    The Oxford Handbook of Chinese Philosophy is a collection of essays on important texts and figures in the history of Chinese thought. The essays cover both well-known texts such as the Analects and the Zhuangzi as well as many of the lesser-known thinkers in the classical and post-classical Chinese tradition. Most of the chapters focus on thinkers or texts in one of three important historical movements: Classical ("pre-Qin") Chinese philosophy, Chinese Buddhism, and the Confucian response to Buddhism ("neo-Confucianism" broadly construed).
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  5.  28
    Darwinism, Christianity, and the Great Vivisection Debate.Rod Preece - 2003 - Journal of the History of Ideas 64 (3):399-419.
    The reputation of the Christian tradition has fared poorly in the literature on the history of attitudes to nonhuman animals. This is more a consequence of secularist prejudice than objective scholarship. The idea of "dominion" and the understanding of animal souls are almost universally misrepresented. There has been no firmer conclusion than that Charles Darwin's theory of evolution had a profoundly beneficial impact on the recognition of our similarities to, kinship with, and consequent moral obligations to, other species. In reality, (...)
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  6. Revelatory Regret and the Standpoint of the Agent.Justin F. White - 2017 - Midwest Studies in Philosophy 41 (1):225-240.
    Because anticipated and retrospective regret play important roles in practical deliberation and motivation, better understanding them can illuminate the contours of human agency. However, the possibility of self-ignorance and the fact that we change over time can make regret—especially anticipatory regret—not only a poor predictor of where the agent will be in the future but also an unreliable indicator of where the agent stands. Granting these, this paper examines the way in which prospective and, particularly, retrospective regret can nevertheless yield (...)
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  7. Meritocracy and the Tests of Virtue in Greek and Confucian Political Thought.Justin Tiwald & Jeremy Reid - 2024 - Journal of Confucian Philosophy and Culture 41:111–147.
    A crucial tenet of virtue-based or expertise-based theorizing about politics is that there are ways to identify and select morally and epistemically excellent people to hold office. This paper considers historical challenges to this task that come from within Greek and Confucian thought and political practice. Because of how difficult it is to assess character in ordinary settings, we argue that it is even more difficult to design institutions that select for virtue at the much wider political scale. Specifically, we (...)
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  8.  12
    Attributions of Consciousness.Justin Sytsma - 2016 - In Justin Sytsma & Wesley Buckwalter (eds.), A Companion to Experimental Philosophy. Malden, MA: Wiley. pp. 257–278.
    This chapter focuses on attributions of phenomenal consciousness, leaving to the side interesting questions about how people attribute other types of consciousness. While researchers are not in perfect agreement about how the concept of phenomenal consciousness should be understood, the standard line is that a creature is phenomenally conscious just in case it has phenomenally conscious mental states, and that a mental state is phenomenally conscious just in case it has phenomenal qualities. The chapter explores whether lay people employ the (...)
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  9.  71
    Norms and the Agency of Justice.Justin Weinberg - 2009 - Analyse & Kritik 31 (2):319-338.
    In this paper I argue that when thinking about justice, political philosophers should pay more attention to social norms, not just the usual subjects of basic principles, rights, laws, and policies. I identify two widely-endorsed ideas about political philosophy that interfere with recognizing the importance of social norms—ideas I dub ‘compulsoriness’ and ‘institutionalism’—and argue for their rejection. I do this largely by focusing on questions about who can and should be an agent of justice. I argue that careful reflection on (...)
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  10.  12
    Causation attributions and corpus analysis.Justin Sytsma, Roland Bluhm, Pascale Willemsen, Kevin Reuter, Eugen Fischer & Mark Douglas Curtis - 2022 - In Pascale Willemsen & Alex Wiegmann (eds.), Advances in Experimental Philosophy of Causation. Bloomsbury Publishing. pp. 209-238.
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  11.  53
    Advances in Experimental Philosophy of Mind.Justin Sytsma (ed.) - 2014 - New York: Bloomsbury.
    Leading researchers in the philosophy of mind present and explore cutting edge research in the exciting new field of experimental philosophy.
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  12. Understanding tourism as an academic community, study, and/or discipline.Justin Taillon & Tazim Jamal - 2009 - In David Papineau (ed.), Philosophy. New York: Oxford University Press. pp. 4-20.
    Tourism literature has shown there is a disagreement amongst academics conducting tourism research as to whether tourism is an academic community, academic study, and/or academic discipline. These three terms are used loosely and change in meaning depending upon the author, source, context, and discipline of the author(s). The following paper identifies tourism’s current position in academia using these three ideas of academic acceptance as tools to guide the discussion. Also guiding the discussion are ideas from tourism scholars and Kuhn’s ideas (...)
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  13.  37
    Two Origin Stories for Experimental Philosophy.Justin Sytsma - unknown
    Both advocates and critics of experimental philosophy often describe it in narrow terms as being the empirical study of people’s intuitions about philosophical cases. This conception corresponds with a narrow origin story for the field—it grew out of a dissatisfaction with the uncritical use of philosophers’ own intuitions as evidence for philosophical claims. In contrast, a growing number of experimental philosophers have explicitly embraced a broad conception of the sub-discipline, which treats it as simply the use of empirical methods to (...)
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  14.  17
    A Companion to Experimental Philosophy.Justin Sytsma & Wesley Buckwalter (eds.) - 2016 - Malden, MA: Wiley.
    This is a comprehensive collection of essays that explores cutting-edge work in experimental philosophy, a radical new movement that applies quantitative and empirical methods to traditional topics of philosophical inquiry. Situates the discipline within Western philosophy and then surveys the work of experimental philosophers by sub-discipline Contains insights for a diverse range of fields, including linguistics, cognitive science, anthropology, economics, and psychology, as well as almost every area of professional philosophy today Edited by two rising scholars who take a broad (...)
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  15.  13
    Oscillator-based memory for serial order.Gordon D. A. Brown, Tim Preece & Charles Hulme - 2000 - Psychological Review 107 (1):127-181.
  16. Ectoplasm Earth.Justin Tiehen - 2012 - Canadian Journal of Philosophy 42 (3-4):167-185.
    What does it mean to say that the mental is nothing over and above the physical? In other words, what exactly is the thesis of physicalism about the mental? The question has not received the philosophical attention it deserves. If that sounds woefully uninformed, it's probably because you are mistaking my restricted thesis of physicalism about the mental for the unrestricted thesis of physicalism simpliciter. Physicalism simpliciter is the doctrine that everything is physical; equivalently, that there is nothing over and (...)
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  17.  33
    Why It's OK to Mind Your Own Business.Justin Tosi & Brandon Warmke - 2023 - Routledge.
    Every year, millions of students in the United States and around the world graduate from high school and college. Commencement speakers—often distilling the hopes of parents and four years of messaging from educators—tell graduates that they must do something grand, ambitious, or far-reaching. Change the world. Disrupt the status quo. Every problem in the world is your problem, awaiting your solutions. -/- This book is an antidote to that advice. It provides a clear-eyed assessment of three types of people who (...)
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  18.  78
    The Robots of the Dawn of Experimental Philosophy of Mind.Justin Sytsma - unknown
    In this chapter, I consider two hypotheses that have informed recent work in experimental philosophy of mind. The first is a positive hypothesis put forward by Fiala, Arico, and Nichols : Categorization of an entity as an agent through fast, automatic, and domain-specific processing produces a disposition to ascribe a wide range of mental states to that entity. The second is a negative hypothesis put forward by Sytsma and Machery: The existence of phenomenally conscious mental states is not obvious from (...)
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  19. Don't Block the Exits.Justin Tosi & Brandon Warmke - 2022 - In J. P. Messina (ed.), New Directions in the Ethics and Politics of Speech. New York, NY: Routledge. pp. 50-60.
    In contemporary political discussions, it is depressingly common to see people criticized for expressing impure beliefs. Moreover, those who sometimes defect from their tribe are criticized for failing to be firmly enough on the side of the angels. We consider explanations for this behavior, including its relationship to moral grandstanding. We will also argue, on both moral and epistemic grounds, in favor of a norm against “blocking the exits.” We should not use social pressure to discourage people from publicly changing (...)
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  20. 'Stop Being So Judgmental!’: A Spinozist Model of Personal Tolerance.Justin Steinberg - 2020 - In Mitja Sardoč (ed.), The Palgrave Handbook of Toleration. Palgrave-Macmillan. pp. 1077 - 1093.
    This chapter considers the challenges to, and the resources for, cultivating a personal capacity for tolerance, given a Spinozist account of belief-formation. After articulating two main components of personal tolerance, I examine the features of Spinoza’s theory of cognition that make the cultivation of tolerance so difficult. This is followed by an analysis of Spinoza’s account of overcoming intolerant tendencies. Ultimately, I argue that the capacity of individuals to be tolerant depends crucially on the establishment of conditions of trust, conditions (...)
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  21. The everyday ethics of borrowing and spending : evaluating economic risk and reward.Justin Welby - 2019 - In Michael Lamb & Brian A. Williams (eds.), Everyday ethics: moral theology and the practices of ordinary life. Washington, DC: Georgetown University Press.
     
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  22.  5
    Calculating the Criminal.Justin Wooley - 2024 - Southwest Philosophy Review 40 (1):105-113.
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  23.  8
    Striving, Happiness, and the Good.Justin Steinberg - 2021 - In Marcus P. Adams (ed.), A Companion to Hobbes. Hoboken, NJ: Wiley-Blackwell. pp. 431–447.
    This chapter argues that Spinoza's commitment to an essentialist reading of striving helps to explain his profound, and somewhat underappreciated, break with Thomas Hobbes not only in terms of his views of right and obligation, but also in terms of his conceptions of happiness and the good. It examines the similarities between Thomas Hobbes's and Spinoza's views on motivation. This is followed by an analysis of the distinct ways in which they understand striving, and in turn agency and artifice, showing (...)
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  24. Personal Acts, Habit, and Embodied Agency in Merleau-Ponty's Phenomenology of Perception.Justin F. White - 2022 - In Jeremy Dunham & Komarine Romdenh-Romluc (eds.), Habit and the History of Philosophy. New York, NY: Rewriting the History of Philosophy. pp. 152–165.
    In Aspiration, Agnes Callard examines the phenomenon of aspiration, the process by which one acquires values and becomes a certain kind of person. Aspiring to become a certain type of person involves more than wanting to act in certain ways. We want to come to see the world in a certain way and to develop the dispositions, attributes, and skills that allow us to seamlessly and effectively respond to situations. The skilled athlete or musician, for example, has developed the muscle (...)
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  25. Agency, Identity, and Alienation in The Sickness unto Death.Justin F. White - 2019 - In Patrick Stokes, Eleanor Helms & Adam Buben (eds.), The Kierkegaardian Mind. New York: Routledge. pp. 305-316.
    In The Sickness unto Death, Kierkegaard describes selfhood as an achievement, specifically claiming that the self’s task ‘is to become itself’ (SUD, 29/SKS 11, 143). But how can one can become who or what one already is, and what sort of achievement is it? This chapter draws on the work of Christine Korsgaard, another philosopher who sees selfhood as an achievement, using her notion of practical identity to explore Kierkegaard’s accounts of the structure of the self and of selfhood as (...)
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  26. The essence of grounding.Justin Zylstra - 2019 - Synthese 196 (12):5137-5152.
    I develop a reduction of grounding to essence. My approach is to think about the relation between grounding and essence on the model of a certain conceptof existential dependence. I extend this concept of existential dependence in a coupleof ways and argue that these extensions provide a reduction of grounding to essenceif we use sorted variables that range over facts and take it that for a fact to obtain is forit to exist. I then use the account to resolve various (...)
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  27. Collective Essence and Monotonicity.Justin Zylstra - 2019 - Erkenntnis 84 (5):1087-1101.
    This paper focuses on the concept of collective essence: that some truths are essential to many items taken together. For example, that it is essential to conjunction and negation that they are truth-functionally complete. The concept of collective essence is one of the main innovations of recent work on the theory of essence. In a sense, this innovation is natural, since we make all sorts of plural predications. It stands to reason that there should be a distinction between essential and (...)
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  28. Essence, necessity, and definition.Justin Zylstra - 2019 - Philosophical Studies 176 (2):339-350.
    What is it for something to be essential to an item? For some time, it was standard to think that the concept of necessity alone can provide an answer: for something to be essential to an item is for it to be strictly implied by the existence of that item. We now tend to think that this view fails because its analysans is insufficient for its analysandum. In response, some argue that we can supplement the analysis in terms of necessity (...)
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  29. Making semantics for essence.Justin Zylstra - 2019 - Inquiry: An Interdisciplinary Journal of Philosophy 62 (8):859-876.
    ABSTRACTIn this paper, I develop a truthmaker semantics for essence and use the semantics to investigate the explanatory role of essence.
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  30. What Biological Functions Are and Why They Matter.Justin Garson - 2019 - New York: Cambridge University Press.
    The biological functions debate is a perennial topic in the philosophy of science. In the first full-length account of the nature and importance of biological functions for many years, Justin Garson presents an innovative new theory, the 'generalized selected effects theory of function', which seamlessly integrates evolutionary and developmental perspectives on biological functions. He develops the implications of the theory for contemporary debates in the philosophy of mind, the philosophy of medicine and psychiatry, the philosophy of biology, and biology (...)
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  31.  29
    Awe for the tiger, love for the lamb: a chronicle of sensibility to animals.Rod Preece (ed.) - 2002 - Vancouver: UBC Press.
    From the myths of the ancient world to the Middle Ages to Darwin and beyond, Preece captures the most telling and fascinating accounts of humankind's ...
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  32.  88
    A Critical Overview of Biological Functions.Justin Garson - 2016 - Dordrecht: Springer.
    This book is a critical survey of and guidebook to the literature on biological functions. It ties in with current debates and developments, and at the same time, it looks back on the state of discourse in naturalized teleology prior to the 1970s. It also presents three significant new proposals. First, it describes the generalized selected effects theory, which is one version of the selected effects theory, maintaining that the function of a trait consists in the activity that led to (...)
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  33.  49
    Contrastive Reasons.Justin Snedegar - 2017 - New York, NY: Oxford University Press.
    Justin Snedegar develops and defends contrastivism about reasons. This is the view that normative reasons are fundamentally reasons for or against actions or attitudes only relative to sets of alternatives. Simply put, reasons are always reasons to do one thing rather than another, instead of simply being reasons to do something, full stop.
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  34.  3
    Review of Conwy Lloyd Morgan: The Interpretation of Nature[REVIEW]C. T. Preece - 1906 - International Journal of Ethics 16 (4):517-518.
  35.  14
    The landing zone – Ground for model transfer in chemistry.Justin Price - 2019 - Studies in History and Philosophy of Science Part A 77:21-28.
  36. Moral Disagreement and Moral Semantics.Justin Khoo & Joshua Knobe - 2016 - Noûs:109-143.
    When speakers utter conflicting moral sentences, it seems clear that they disagree. It has often been suggested that the fact that the speakers disagree gives us evidence for a claim about the semantics of the sentences they are uttering. Specifically, it has been suggested that the existence of the disagreement gives us reason to infer that there must be an incompatibility between the contents of these sentences. This inference then plays a key role in a now-standard argument against certain theories (...)
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  37. Constitutive and Consequentialist Essence.Justin Zylstra - 2019 - Thought: A Journal of Philosophy 8 (3):190-199.
    Recent work on essence describes essence as assimilated to definition. It also posits a plurality of kinds of essence.Howdoes assimilation relate to pluralism? According to one view, a kind of essence is adequate only if it is definitional: something is essential to an item, in the relevant sense, only if it is part of what it is to be that item. In this paper, I argue that assimilation and pluralism are in tension with respect to consequentialist essence. This is problematic (...)
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  38. On Predicting Recidivism: Epistemic Risk, Tradeoffs, and Values in Machine Learning.Justin B. Biddle - 2022 - Canadian Journal of Philosophy 52 (3):321-341.
    Recent scholarship in philosophy of science and technology has shown that scientific and technological decision making are laden with values, including values of a social, political, and/or ethical character. This paper examines the role of value judgments in the design of machine-learning systems generally and in recidivism-prediction algorithms specifically. Drawing on work on inductive and epistemic risk, the paper argues that ML systems are value laden in ways similar to human decision making, because the development and design of ML systems (...)
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  39.  67
    Grandstanding: The Use and Abuse of Moral Talk.Justin Tosi & Brandon Warmke - 2020 - New York: Oxford University Press. Edited by Brandon Warmke.
    We are all guilty of it. We call people terrible names in conversation or online. We vilify those with whom we disagree, and make bolder claims than we could defend. We want to be seen as taking the moral high ground not just to make a point, or move a debate forward, but to look a certain way--incensed, or compassionate, or committed to a cause. We exaggerate. In other words, we grandstand. Nowhere is this more evident than in public discourse (...)
  40. Explaining Loss of Standing to Blame.Justin Snedegar - forthcoming - Journal of Moral Philosophy:1-29.
    Both in everyday life and in moral philosophy, many think that our own past wrongdoing can undermine our standing to indignantly blame others for similar wrongdoing. In recent literature on the ethics of blame, we find two different kinds of explanation for this. Relative moral status accounts hold that to have standing to blame, you must be better than the person you are blaming, in terms of compliance with the norm. Fault-based accounts hold that those who blame others for things (...)
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  41. Moral Grandstanding.Justin Tosi & Brandon Warmke - 2016 - Philosophy and Public Affairs 44 (3):197-217.
    Moral grandstanding is a pervasive feature of public discourse. Many of us can likely recognize that we have engaged in grandstanding at one time or another. While there is nothing new about the phenomenon of grandstanding, we think that it has not received the philosophical attention it deserves. In this essay, we provide an account of moral grandstanding as the use of public discourse for moral self-promotion. We then show that our account, with support from some standard theses of social (...)
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  42.  32
    The Meaning of "If".Justin Khoo - 2022 - New York, USA: Oxford University Press.
    Despite its small stature, "if" occupies a central place both in everyday language and the philosophical lexicon. In allowing us to talk about hypothetical situations, "if" raises a host of thorny philosophical puzzles about language and logic. Addressing them requires tools from linguistics, logic, probability theory, and metaphysics. Justin Khoo uses these tools to navigate a maze of interconnected issues about conditionals, some of which include: the nature of linguistic communication, the relationship between logical and natural languages, and the (...)
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  43.  40
    Madness: A Philosophical Exploration.Justin Garson - 2022 - New York, NY: Oxford University Press.
    Since the time of Hippocrates, madness has typically been viewed through the lens of disease, dysfunction, and defect. In 'Madness', philosopher of science Justin Garson presents a radically different paradigm for conceiving of madness and the forms that it takes. In this paradigm, which he calls madness-as-strategy, madness is neither a disease nor a defect, but a designed feature, like the heart or lungs.
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  44.  25
    Nature, Human Nature, and Human Difference: Race in Early Modern Philosophy.Justin E. H. Smith - 2015 - Princeton: Princeton University Press.
    People have always been xenophobic, but an explicit philosophical and scientific view of human racial difference only began to emerge during the modern period. Why and how did this happen? Surveying a range of philosophical and natural-scientific texts, dating from the Spanish Renaissance to the German Enlightenment, Nature, Human Nature, and Human Difference charts the evolution of the modern concept of race and shows that natural philosophy, particularly efforts to taxonomize and to order nature, played a crucial role. Smith demonstrates (...)
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  45.  67
    Rahel Jaeggi’s theory of alienation.Justin Evans - 2022 - History of the Human Sciences 35 (2):126-143.
    Rahel Jaeggi’s theory of alienation has received less attention than her work on forms of life and capitalism. This theory avoids the problems of traditional theories of alienation: objectivism, paternalism, and essentialism. It also sidesteps post-structuralist criticisms of the theory of alienation. However, Jaeggi’s theory is flawed in two ways: it is not historically specific, and so cannot explain why alienation is a problem for modernity rather than other historical periods, and it is difficult to connect to social critique. I (...)
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  46. Margaret MacDonald’s scientific common-sense philosophy.Justin Vlasits - 2022 - British Journal for the History of Philosophy 30 (2):267-287.
    Margaret MacDonald (1907–56) was a central figure in the history of early analytic philosophy in Britain due to both her editorial work as well as her own writings. While her later work on aesthetics and political philosophy has recently received attention, her early writings in the 1930s present a coherent and, for its time, strikingly original blend of common-sense and scientific philosophy. In these papers, MacDonald tackles the central problems of philosophy of her day: verification, the problem of induction, and (...)
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  47. Teleosemantics, selection and novel contents.Justin Garson & David Papineau - 2019 - Biology and Philosophy 34 (3):36.
    Mainstream teleosemantics is the view that mental representation should be understood in terms of biological functions, which, in turn, should be understood in terms of selection processes. One of the traditional criticisms of teleosemantics is the problem of novel contents: how can teleosemantics explain our ability to represent properties that are evolutionarily novel? In response, some have argued that by generalizing the notion of a selection process to include phenomena such as operant conditioning, and the neural selection that underlies it, (...)
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  48. Essence with Ground.Justin Zylstra - 2018 - Analytic Philosophy 59 (2):193-207.
  49. A Generalized Selected Effects Theory of Function.Justin Garson - 2017 - Philosophy of Science 84 (3):523-543.
    I present and defend the generalized selected effects theory (GSE) of function. According to GSE, the function of a trait consists in the activity that contributed to its bearer’s differential reproduction, or differential retention, within a population. Unlike the traditional selected effects (SE) theory, it does not require that the functional trait helped its bearer reproduce; differential retention is enough. Although the core theory has been presented previously, I go significantly beyond those presentations by providing a new argument for GSE (...)
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  50. Awe for the Tiger, Love for the Lamb: A Chronicle of Sensibility to Animals.Rod Preece (ed.) - 2002 - Vancouver: Routledge.
    First Published in 2003. Routledge is an imprint of Taylor & Francis, an informa company.
     
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